EST details — SGN-C28055
| Search information |
| Request: 28055 | Match: SGN-C28055 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C28055 | Clone name: cLEF-46-G6 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176868 is on microarray TOM1: SGN-S1-1-7.2.8.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176868 [TUS-25-B2] | Trace: SGN-T182101 | EST: SGN-E369612 | Direction: 5' | Facility: INRA |
| Clone: SGN-C176868 [TUS-25-B2] | Trace: SGN-T182177 | EST: SGN-E369688 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247134 | Length: 600 bp (1010 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247134 [] (trimmed)
GTGGAGATCTCTTTACCCATCGGGGTGGCCCAGTGGTTTGAGCTTGGAACTTCCATGTTGGAGGTCTCAAGTTCAAATCCCCTTGCCAGGGAAAG
CAAGGGGTTTGCCTTCTGCGTAGAATTCGTCACACCAGGCTTGCCTAGTGCGGGTTACCTCTCCTTTGTGGTTTGCGAGAGTTATTGCACAGGAG
CAGGGGTTTTACCCTTTGTGCACCCAAAGGGTAGCGGCTGCGTGTTTTCCTTGGCATAAAAAGAAATTAAAAAAAATATGGAGATCTGTTTCCCT
ATTGTATAGAACATTTGAAGGGGGGATACCAGCCTTATTTGCTGCCATAGACTGCTTCAGTTAATTTATTCCAGACTACTCTTTCATCCTGCTAA
ATCTCCAGAGCCACTTGAACAAAATGCTTTTATTATGATTGCCTGTTTAATGTGATGGTTAGGAATGCAATAAGTGAATGTTCTTTGCTAAAGGT
TATCCGGCCACAGTAGGTGGTAGGGTCCTTGCTGCCTTTTGTTGAACTTCTGTTGTTCAAGGAGTATAACTTATAAAGGTAATCTTACGGTCTTA
CCTCAAAGATATTGCAACTGATAATCATTT
CAAGGGGTTTGCCTTCTGCGTAGAATTCGTCACACCAGGCTTGCCTAGTGCGGGTTACCTCTCCTTTGTGGTTTGCGAGAGTTATTGCACAGGAG
CAGGGGTTTTACCCTTTGTGCACCCAAAGGGTAGCGGCTGCGTGTTTTCCTTGGCATAAAAAGAAATTAAAAAAAATATGGAGATCTGTTTCCCT
ATTGTATAGAACATTTGAAGGGGGGATACCAGCCTTATTTGCTGCCATAGACTGCTTCAGTTAATTTATTCCAGACTACTCTTTCATCCTGCTAA
ATCTCCAGAGCCACTTGAACAAAATGCTTTTATTATGATTGCCTGTTTAATGTGATGGTTAGGAATGCAATAAGTGAATGTTCTTTGCTAAAGGT
TATCCGGCCACAGTAGGTGGTAGGGTCCTTGCTGCCTTTTGTTGAACTTCTGTTGTTCAAGGAGTATAACTTATAAAGGTAATCTTACGGTCTTA
CCTCAAAGATATTGCAACTGATAATCATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247134] | SGN-U592877 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61545 [Download][View] | Facility Assigned ID: TMGGZ39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 14.5 |
Working
