EST details — SGN-E280604

Search information 
Request: 280604Match: SGN-E280604
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72232Clone name: cLER-1-J1
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185039 is on microarray TOM1: SGN-S1-1-4.2.12.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185039 [TUS-46-F13] Trace: SGN-T199030 EST: SGN-E397704 Direction: 5' Facility: INRA
Clone: SGN-C185039 [TUS-46-F13] Trace: SGN-T199091 EST: SGN-E397765 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280604Length: 419 bp (722 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280604 [] (trimmed) CATTCCTGAGCTAAAAGAAAAAACATGTCTTGTTCAAATTTGACAATGTTGGTGTCCTCAAAACCATCTCTTTCTGAATCCTCTGCCCTTTCTTT
CCGCTCTGCTGTCAGCTCTTTTCAGCTTCCTAACCACAACCTATCAGGCCCTTCAAACCCCTCAAGATCATCATCAGTTATCCCTGTCCGATGTG
GTCTCCGTGATCTGCGTGATCGAATTGACTCTGTCAAGAACACACAGAAGATTACTGAGGCTATGAAGCTTGTGGCTGCTGCTAAAGTCAGAAGA
GCACAAGAAGCTGTTGTGGGTGCGAGGCCTTTCTCTGAGACTTTGGTTGAGGTACTTTACAACATCAATGAGCAGCTCCAGACAGATGACATTGA
TGTACCACTCACCAAAGTAAGACCTGTCAAGAAAGTGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280604] SGN-U581255 Tomato 200607 Build 2 125 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92158 [Download][View] Facility Assigned ID: TPRAC49TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0140 Quality Trim Threshold: 14.5