EST details — SGN-E280640

Search information 
Request: 280640Match: SGN-E280640
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72199Clone name: cLER-1-H18
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178553 is on microarray TOM1: SGN-S1-1-2.4.4.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178553 [TUS-29-H7] Trace: SGN-T184060 EST: SGN-E370991 Direction: 3' Facility: INRA
Clone: SGN-C178553 [TUS-29-H7] Trace: SGN-T184061 EST: SGN-E370992 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280640Length: 472 bp (799 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280640 [] (trimmed) CAAAATGGAGTCAAAGTTTGCTCACATTATTGTTTTCTTTCTTCTTGCAACTTCCTTTGAGACTCTCATGGCACGAAAAGAAATTGGTGGACCAG
AAGTCATCGAACTTCTAAAGGAATATGAATCTAACTTGATGTGCAAAGGAAAACGAATGTGGCCAGAACTTATTGGTGTACCAGCACAATATGCT
AAGGGAATAATTGAAAAGGAAAATCCATTCATAACTGATGTTCGGATAGGATTGATTGGTTCTCCAGGCACAGCTGATTTTAAGTGTTTTCGAGT
TCGTATTGCTGTAAACATCTTGGATGTTGCTGTATCAATGCCTGTGATTGGTTAATTAATGAAGTAATTAAGTAGCCACATGTCAAAAAATAATT
AGGGTTCATGTCTGTTCATTAATTATAATGTACCCATGCATGTACTCTTACAATACATAATGGAATAAATAAGTGTGACTTGATTAAATATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280640] SGN-U581582 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92194 [Download][View] Facility Assigned ID: TPRAD45TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.944 Expected Error Rate: 0.0116 Quality Trim Threshold: 14.5