EST details — SGN-C28097

Search information 
Request: 28097Match: SGN-C28097
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C28097Clone name: cLEF-46-I5
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176882 is on microarray TOM1: SGN-S1-1-1.2.8.5
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176882 [TUS-25-B16] Trace: SGN-T182027 EST: SGN-E369538 Direction: 3' Facility: INRA
Clone: SGN-C176882 [TUS-25-B16] Trace: SGN-T182028 EST: SGN-E369539 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247360Length: 328 bp (423 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247360 [] (trimmed) GGCGAAGTGAACTGATAAAAAATGGCAAACGGAGAAGGTGAAGTAGTGTGTGTTACCGGAGGCAGCGGTTTTATTGGTTCATGGCTTGTTAGTTC
TCTACTTGACCGTGGCTACACTGTTCACGCTACTGTTAAAGATCTCAATGATGAGAAGGAGACGAAGCATTTACTTGGTTTAGAAGGAGCTGAAT
CTCGTCTTCGTCTTTATCAAATTGATTTGCTTGATTACGATTCAATTGTTTCTGCGATTACTGGTGCTGTTGGTGTTTTTCATCTTGCTTCTCCT
TGCATTGTTGATGAAGTTAAAGATCCTGAGAATGATCTTCTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247360] SGN-U575588 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61771 [Download][View] Facility Assigned ID: TMGGY51TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0001 Quality Trim Threshold: 14.5