EST details — SGN-C28204

Search information 
Request: 28204Match: SGN-C28204
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C28204Clone name: cLEF-46-O13
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176932 is on microarray TOM1: SGN-S1-1-7.4.8.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176932 [TUS-25-D18] Trace: SGN-T182037 EST: SGN-E369548 Direction: 3' Facility: INRA
Clone: SGN-C176932 [TUS-25-D18] Trace: SGN-T182038 EST: SGN-E369549 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247126Length: 338 bp (426 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247126 [] (trimmed) TTGCACGAGGAGAGACAGAAAAAGATACTCTCTCCGCATCTATAGATATAGAGAGGGAAAACCTATATTTATAGAGAGAGAAACTCTAGAGAGAG
AAAAAGCCATGTATGTGTATATATAGGCTATATAGATTACAGTGAAAAAAACTTTCTTTTTCATTCCTCCATTATTCGTTCATTCTCTCAGCTCA
AAGACCACAGAATTTTCAAGAAATTTATGACGTTTTGAAGTTAAAGTTTTGGTTTTTTTCCAGATTTTTCTCGGAATTTATGATTTCAGAGAAAA
AAAATCAATGCAAAAGCTCCGTTTAATGGTCGATTTAGCTTGCGTTTTGTTAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247126] SGN-U572190 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61537 [Download][View] Facility Assigned ID: TMGGY91TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.926 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5