EST details — SGN-E282244
| Search information |
| Request: 282244 | Match: SGN-E282244 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78076 | Clone name: cLES-4-E4 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185185 is on microarray TOM1: SGN-S1-1-2.4.12.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185185 [TUS-46-L15] | Trace: SGN-T199053 | EST: SGN-E397727 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185185 [TUS-46-L15] | Trace: SGN-T199108 | EST: SGN-E397782 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282244 | Length: 534 bp (931 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282244 [] (trimmed)
GAAAGCGTTGGTGGTCTTGAGGTAATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCGTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACAT
AGGCACGGTATGGAGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGGGTATCTATTGCTTCATTCATCT
TGGGACCAAGGGACACAGCAGTGGAACCACCATCTGAGCTGGTAGATGCTGAACACCCCCGTATGTATGTTCCTTTCACTTTCACTGATTATAGA
AAGCTCCGTTACTCAACAAAGTTGCAGGCAGGGGAAACTCTTGAACTTATGCGTACTAACTTGTAAAACTTTGGCAAGCATCTAAGATCCTCCGT
TATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGACAATATATCTTAGTGGGATTTCATCATCTATATATCGTCAATGATCTAAGCTACAA
TAGCCTATAAAATGGCAGAGCATTTATGCATATCAGCAAAGCTTCTATTATCCATCTTT
AGGCACGGTATGGAGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGGGTATCTATTGCTTCATTCATCT
TGGGACCAAGGGACACAGCAGTGGAACCACCATCTGAGCTGGTAGATGCTGAACACCCCCGTATGTATGTTCCTTTCACTTTCACTGATTATAGA
AAGCTCCGTTACTCAACAAAGTTGCAGGCAGGGGAAACTCTTGAACTTATGCGTACTAACTTGTAAAACTTTGGCAAGCATCTAAGATCCTCCGT
TATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGACAATATATCTTAGTGGGATTTCATCATCTATATATCGTCAATGATCTAAGCTACAA
TAGCCTATAAAATGGCAGAGCATTTATGCATATCAGCAAAGCTTCTATTATCCATCTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282244] | SGN-U564520 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T97985 [Download][View] | Facility Assigned ID: TPSAN26TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 12.5 |
Working
