EST details — SGN-E282587
| Search information |
| Request: 282587 | Match: SGN-E282587 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C70520 | Clone name: cLER-15-C1 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185143 is on microarray TOM1: SGN-S1-1-4.2.11.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185143 [TUS-46-J21] | Trace: SGN-T1874 | EST: SGN-E378644 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C185143 [TUS-46-J21] | Trace: SGN-T199047 | EST: SGN-E397721 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185143 [TUS-46-J21] | Trace: SGN-T199104 | EST: SGN-E397778 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282587 | Length: 535 bp (784 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282587 [] (trimmed)
GGACGCTATTGGACCTGCGGCTCCCGGGGGCTGCAGGGTATTTGGTGCCCTAAATCAAAATTCAAAAAAATTCTATTCATCGGTTCACTTTGGTC
ACCCTCACCGCGCAGCTACCGTCGGCGACCAACAGAACAGCGGCGCAGCCACCGTCGGCGACCATCAGGGCAGCGGCGTAGAAACCGTCGGCAAC
CAGAAGGGCAGCGGAGCTGTTTTGGCTGCCATTTTCAAGTGCTCTTATTGAATATATACCATCATTATGGATGCTCCGAATGAACTGAGCTACAA
ACCACCATCAGAATTTGAGGAGGTCAGAAAGGATTCACTTGTCAATCTTAACATTTCAGACTCAACTGAGCTCTGGCTTATACAGTGGCCCTTTA
ATCAACATCCAGGTCTTGATGGGCAAGAAGTTTCATTGAAGCTCCATCATGATGGGCATATCGGCAGTTTTGAGGATTCATCTGGTAAATCATAT
GAGGCGGTCAGTTGTAGAGCGCACGACCCCGATGCGTTGGTCTTTCTATCATCTGATTCT
ACCCTCACCGCGCAGCTACCGTCGGCGACCAACAGAACAGCGGCGCAGCCACCGTCGGCGACCATCAGGGCAGCGGCGTAGAAACCGTCGGCAAC
CAGAAGGGCAGCGGAGCTGTTTTGGCTGCCATTTTCAAGTGCTCTTATTGAATATATACCATCATTATGGATGCTCCGAATGAACTGAGCTACAA
ACCACCATCAGAATTTGAGGAGGTCAGAAAGGATTCACTTGTCAATCTTAACATTTCAGACTCAACTGAGCTCTGGCTTATACAGTGGCCCTTTA
ATCAACATCCAGGTCTTGATGGGCAAGAAGTTTCATTGAAGCTCCATCATGATGGGCATATCGGCAGTTTTGAGGATTCATCTGGTAAATCATAT
GAGGCGGTCAGTTGTAGAGCGCACGACCCCGATGCGTTGGTCTTTCTATCATCTGATTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282587] | SGN-U571864 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95107 [Download][View] | Facility Assigned ID: TPRCE13THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0103 | Quality Trim Threshold: 14.5 |
Working
