EST details — SGN-E283112
| Search information |
| Request: 283112 | Match: SGN-E283112 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C71336 | Clone name: cLER-17-I9 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178894 is on microarray TOM1: SGN-S1-1-5.2.3.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178894 [TUS-30-F12] | Trace: SGN-T1515 | EST: SGN-E378181 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C178894 [TUS-30-F12] | Trace: SGN-T184931 | EST: SGN-E372139 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178894 [TUS-30-F12] | Trace: SGN-T184932 | EST: SGN-E372140 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283112 | Length: 513 bp (623 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283112 [] (trimmed)
CTACACCACCCACATTCTACCTTCATCTCTCTCTACTTTCCGATTCACCTTCCTCCTCTTGATTTTGTTATTGTTCTATCGGCTATGTCAATAGA
CGGTGGAAGATTTTACTGGGAGAGGAATTCCAATGAAAAGGTCAAAGGAATTGTGATAATCTTCGCTTGGGTTTCAATTCAGGAAACTGAACTGA
AGAGCTATGTTGATCTTTATGCTTCTCTTGGTTGGAGCTCTCTTGTCTGCCTTGCCGATTTCGCTACCCTATACATAACTGAGAAGGCTACATCA
CTGGCATATTCTCTTCTGAGAGAGCTTGTCGAGGAGCTAAGATGTCGGCCTTGTCCAGTTGTTGTGGCAGCTCTTTCTGGTGGTTCTAAGGCCTG
CATGTATAAGTTTTTTCAGATTGTTAAAGGGAGATCTGAAGCTCAAGTTAATCTGGTACGCAATTCTTTGAATCTGCTGTGAGGAGGACAGCCAA
TTGGTCATTAACTGCATCTCAGGTCAAATTTATGATTC
CGGTGGAAGATTTTACTGGGAGAGGAATTCCAATGAAAAGGTCAAAGGAATTGTGATAATCTTCGCTTGGGTTTCAATTCAGGAAACTGAACTGA
AGAGCTATGTTGATCTTTATGCTTCTCTTGGTTGGAGCTCTCTTGTCTGCCTTGCCGATTTCGCTACCCTATACATAACTGAGAAGGCTACATCA
CTGGCATATTCTCTTCTGAGAGAGCTTGTCGAGGAGCTAAGATGTCGGCCTTGTCCAGTTGTTGTGGCAGCTCTTTCTGGTGGTTCTAAGGCCTG
CATGTATAAGTTTTTTCAGATTGTTAAAGGGAGATCTGAAGCTCAAGTTAATCTGGTACGCAATTCTTTGAATCTGCTGTGAGGAGGACAGCCAA
TTGGTCATTAACTGCATCTCAGGTCAAATTTATGATTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283112] | SGN-U569771 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95963 [Download][View] | Facility Assigned ID: TPRCM53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 14.5 |
Working
