EST details — SGN-E283183
| Search information |
| Request: 283183 | Match: SGN-E283183 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C71299 | Clone name: cLER-17-H17 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183487 is on microarray TOM1: SGN-S1-1-4.1.1.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183487 [TUS-42-E21] | Trace: SGN-T195946 | EST: SGN-E394620 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183487 [TUS-42-E21] | Trace: SGN-T195946 | EST: SGN-E399144 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183487 [TUS-42-E21] | Trace: SGN-T196118 | EST: SGN-E394792 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183487 [TUS-42-E21] | Trace: SGN-T200237 | EST: SGN-E399143 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283183 | Length: 569 bp (797 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283183 [] (trimmed)
AATTCCCATGAAATATGGGAGAATAGATGTTTCTGGACCTGATGAATGTCCAGAAGAGGGAAGGCTTCCTGATGCTGGCCCCCCTAACCCTTCAT
CTCATTTGCGAGATGTCTTCTACAGAATGGGACTAAATGATAAGGAAATTGTTGCACTTTCTGGGGCACACACTTTGGGGAGATCCAGACCAGAG
CGTAGTGGTTGGGGCAAGCCAGAAACAAGATACACGAAAGATGGACCAGGAAGCCCTGGAGGACAATCATGGACTGTGCAGTGGTTGAAATTTGA
CAATTCCTACTTTAAGGACATTAAAGAACAAAGAGATGAAGATCTACTAGTTTTGCCTACAGATGCTGTTCTTTTTGAAGATTCTTCATTTAAGG
AATATGCAGAGAAGTATGCTGTAAATCAAGATGTATTTTTCAAAGATTACGCGGAAGCCCATGCCAAACTGAGCAACCTTGGTGCTAAATTTGAT
CCACCTGAGGGTTTCTCAATAGACAATAATCCTACACAAGTTCAACCAGAGAAGTTCGTGGCAGCAAAATACTCAACTTGAAAGAGAGAGCTCT
CTCATTTGCGAGATGTCTTCTACAGAATGGGACTAAATGATAAGGAAATTGTTGCACTTTCTGGGGCACACACTTTGGGGAGATCCAGACCAGAG
CGTAGTGGTTGGGGCAAGCCAGAAACAAGATACACGAAAGATGGACCAGGAAGCCCTGGAGGACAATCATGGACTGTGCAGTGGTTGAAATTTGA
CAATTCCTACTTTAAGGACATTAAAGAACAAAGAGATGAAGATCTACTAGTTTTGCCTACAGATGCTGTTCTTTTTGAAGATTCTTCATTTAAGG
AATATGCAGAGAAGTATGCTGTAAATCAAGATGTATTTTTCAAAGATTACGCGGAAGCCCATGCCAAACTGAGCAACCTTGGTGCTAAATTTGAT
CCACCTGAGGGTTTCTCAATAGACAATAATCCTACACAAGTTCAACCAGAGAAGTTCGTGGCAGCAAAATACTCAACTTGAAAGAGAGAGCTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283183] | SGN-U574727 | Tomato 200607 | Build 2 | 27 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96034 [Download][View] | Facility Assigned ID: TPRCO45TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
