EST details — SGN-E283222
| Search information |
| Request: 283222 | Match: SGN-E283222 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C71303 | Clone name: cLER-17-H20 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178883 is on microarray TOM1: SGN-S1-1-8.2.3.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178883 [TUS-30-F1] | Trace: SGN-T184753 | EST: SGN-E372313 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178883 [TUS-30-F1] | Trace: SGN-T184754 | EST: SGN-E372314 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283222 | Length: 503 bp (842 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283222 [] (trimmed)
ATATGAAGCATATAGTTGGCTAATTTTATTACACAAAATGAAGATATATATACAGAGACTACCACACAGTAGTTGTAGAATTACTCTTTTTGTAT
ACAACTCTTTTGCTGATACAACACTCTTCATCTACTAAAAGACTGACTCAGAAATAATAAATAAACATATAGAATAGGTCTCTACAGTAGGAAAT
ATGAAATGGTAAAAACTAAATTACATTCTATTGATGGTCTATTTACAAAGATCGAGTTCGCCTTACGATATGAAACACACACTTTTGACACTAAG
CTGCCAATCTGAAGTTCATCACTTGATGATGGTTAAAGTCCATTTTCGGTTCCTCTTCTCTCTTTCTTTTGGGCAGAGATAAAGAAGACATTGCC
CTGGCTGACACTACCTTTCTAACAAGTGATTTCCACAGCTCGTCATCACCCTTTTGTTGCACCTTCAATTTGAATTGTCTGCAAAGGGGAACCTG
GCAATCGTTTGGTTGGTCACAAATGGAT
ACAACTCTTTTGCTGATACAACACTCTTCATCTACTAAAAGACTGACTCAGAAATAATAAATAAACATATAGAATAGGTCTCTACAGTAGGAAAT
ATGAAATGGTAAAAACTAAATTACATTCTATTGATGGTCTATTTACAAAGATCGAGTTCGCCTTACGATATGAAACACACACTTTTGACACTAAG
CTGCCAATCTGAAGTTCATCACTTGATGATGGTTAAAGTCCATTTTCGGTTCCTCTTCTCTCTTTCTTTTGGGCAGAGATAAAGAAGACATTGCC
CTGGCTGACACTACCTTTCTAACAAGTGATTTCCACAGCTCGTCATCACCCTTTTGTTGCACCTTCAATTTGAATTGTCTGCAAAGGGGAACCTG
GCAATCGTTTGGTTGGTCACAAATGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283222] | SGN-U583990 | Tomato 200607 | Build 2 | 33 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96073 [Download][View] | Facility Assigned ID: TPRCP46TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0097 | Quality Trim Threshold: 14.5 |
Working
