EST details — SGN-E283781
| Search information |
| Request: 283781 | Match: SGN-E283781 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77110 | Clone name: cLES-1-O5 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184226 is on microarray TOM1: SGN-S1-1-1.4.16.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C77110 [cLES-1-O5] | Trace: SGN-T97456 | EST: SGN-E283780 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C184226 [TUS-44-D16] | Trace: SGN-T198370 | EST: SGN-E397044 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184226 [TUS-44-D16] | Trace: SGN-T199991 | EST: SGN-E398665 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283781 | Length: 551 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E283781 [] (trimmed)
CGGTTGGAACTATTAAAAAGTTGCATAGATATTATATAGCTCATAAGTCATTAACTAATAACAGTGAACTTCATCCTTCAGATGTCAAAGCAAGA
CACATACAAGAGAATCTCTGATAAAAAACTAAAGAACTCAAAAGGAACCATGATCCACCTATGGGAAAAGATTTGATCACAACGAGTCACATCAC
AACTCCCAAGGGATGGGGGTTGAGCTTCATCCTCGATCTTGAAGCTTTGCATCTTTTGCTCATCATGAAGGACAGGAACAACAAAATCCGACTAG
TCTTTTTTCCCTCCTTTATTGGAACCAGAAGCCCGTGGTTTCTGCTTCCCTGACTTTCTTCTGGAACTGACCAGGTTTGGCTGGGTAGAATGAGC
AGGCATGTGATGCCCAGGAACCAAAGCAGGGAACCCAACAGCAGGGATTCCAAAAAGAGCACGGCAGACTCCTGCTTGGTCATAGAAACACCATT
AGCACTGCTATTATGCAAAGAAAAGCGTAAAGCTTGATTTTCAGCAAGACAGCACTGGAGAACAAACCCCAGCCTT
CACATACAAGAGAATCTCTGATAAAAAACTAAAGAACTCAAAAGGAACCATGATCCACCTATGGGAAAAGATTTGATCACAACGAGTCACATCAC
AACTCCCAAGGGATGGGGGTTGAGCTTCATCCTCGATCTTGAAGCTTTGCATCTTTTGCTCATCATGAAGGACAGGAACAACAAAATCCGACTAG
TCTTTTTTCCCTCCTTTATTGGAACCAGAAGCCCGTGGTTTCTGCTTCCCTGACTTTCTTCTGGAACTGACCAGGTTTGGCTGGGTAGAATGAGC
AGGCATGTGATGCCCAGGAACCAAAGCAGGGAACCCAACAGCAGGGATTCCAAAAAGAGCACGGCAGACTCCTGCTTGGTCATAGAAACACCATT
AGCACTGCTATTATGCAAAGAAAAGCGTAAAGCTTGATTTTCAGCAAGACAGCACTGGAGAACAAACCCCAGCCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283781] | SGN-U580933 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T97457 [Download][View] | Facility Assigned ID: TPSAA87TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 14.5 |
Working
