EST details — SGN-E283966
| Search information |
| Request: 283966 | Match: SGN-E283966 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C70225 | Clone name: cLER-13-P1 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185369 is on microarray TOM1: SGN-S1-1-2.4.10.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185369 [TUS-47-D7] | Trace: SGN-T192308 | EST: SGN-E390982 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185369 [TUS-47-D7] | Trace: SGN-T197662 | EST: SGN-E396336 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283966 | Length: 273 bp (698 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283966 [] (trimmed)
TTTTTTTAAAAAGGATTTAATTCTTCAAAATAACAATTCAGAGAAGGGGATGAATTTTTCACACAACAAATTCATGACTTCGAATTATATAAATA
TATGATAAAAATATATTTTTTTTCGAATTACTCTTCTAGTTTTGATATTATTTTGTTTTTTGCGTTCGTTGTGCGTCTCTCCCCCTCTGAGACGA
CGAAAAGCATAATAACAGCAGCAGCAGTTATGGAGATCGGAATTCGATCTCTCTCTATTTTTTTTCATCATGAAATTTGATTA
TATGATAAAAATATATTTTTTTTCGAATTACTCTTCTAGTTTTGATATTATTTTGTTTTTTGCGTTCGTTGTGCGTCTCTCCCCCTCTGAGACGA
CGAAAAGCATAATAACAGCAGCAGCAGTTATGGAGATCGGAATTCGATCTCTCTCTATTTTTTTTCATCATGAAATTTGATTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283966] | SGN-U580201 | Tomato 200607 | Build 2 | 109 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94660 [Download][View] | Facility Assigned ID: TPRBY85TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.906 | Expected Error Rate: 0.0144 | Quality Trim Threshold: 14.5 |
Working
