EST details — SGN-E285964
| Search information |
| Request: 285964 | Match: SGN-E285964 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C75229 | Clone name: cLES-13-F11 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184360 is on microarray TOM1: SGN-S1-1-3.2.16.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184360 [TUS-44-J6] | Trace: SGN-T198406 | EST: SGN-E397080 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184360 [TUS-44-J6] | Trace: SGN-T198407 | EST: SGN-E397081 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285964 | Length: 254 bp (676 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285964 [] (trimmed)
ATATTGGGTCTGCTCTCCTTGTTGCAAGATGAGAAATTGGGTAATGAGCAGCGGCTTCTTGTGGATTCAATGGTTAAAACCAGTAATGTCGTGTC
AACCCTAATAGATGATGTGATGGATACTTCAACAAAGGACAACGGTAGATTCCCTTTGGAGATGAGATATTTTCAGCTACATTCCATGATAAAAG
AAGCTGCTTGTCTTGCCAAGTGTTTGTGTGCTTATAGGGGTTATAATATTTCCATTGAGGGTGA
AACCCTAATAGATGATGTGATGGATACTTCAACAAAGGACAACGGTAGATTCCCTTTGGAGATGAGATATTTTCAGCTACATTCCATGATAAAAG
AAGCTGCTTGTCTTGCCAAGTGTTTGTGTGCTTATAGGGGTTATAATATTTCCATTGAGGGTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285964] | SGN-U581695 | Tomato 200607 | Build 2 | 44 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100277 [Download][View] | Facility Assigned ID: TPSBY30TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0117 | Quality Trim Threshold: 14.5 |
Working
