EST details — SGN-E286829
| Search information |
| Request: 286829 | Match: SGN-E286829 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C75439 | Clone name: cLES-14-B19 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185233 is on microarray TOM1: SGN-S1-1-2.2.12.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185233 [TUS-46-N15] | Trace: SGN-T199060 | EST: SGN-E397734 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185233 [TUS-46-N15] | Trace: SGN-T199113 | EST: SGN-E397787 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286829 | Length: 561 bp (856 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286829 [] (trimmed)
GCGGTACAATGAGTTCAGAAGGAATTTGCTGATGGTACCAATTAGCAAGTGGGAGGATTTAACTAACGACGAAGAAGTAATTGAGGCTTTACAAG
AAGTATATGGCGATGATATTGAGAAGCTAGATCTCCAAATTGGTTTGCACGCGGAGAAGAAAATTAAAGGCTTTGCCATTAGTGAGACTGCCTTT
TTTATATTTCTGCTCATTGCTTCAAGGAGGTTAGAGGCTGATCGATTCTTCACAACTGATTTCAATTCGCGAACCTACACAGAGAAAGGCTTTGA
ATGGGTAAACAAGACAGAGACATTGAAAGATGTCATCGATCGATACTTCCCTGAAATGACAGAGAAATACATGAGATGCACAAGTGCATTCTCAG
TGTGGAGTTCAGATCCAGATCCTAAACACTACTTACCTCTTTATCTGAGACCAGCAACCTAATGGTAGTACTATATTTGGTGATCAACTTTGTAT
GGGGTGATTATGTTAAAACAATGGTAAGTTTGCAAGGAAAATACAAACAACCCTAGTTTACGGTCAGATGAATAAACCTTGTATGA
AAGTATATGGCGATGATATTGAGAAGCTAGATCTCCAAATTGGTTTGCACGCGGAGAAGAAAATTAAAGGCTTTGCCATTAGTGAGACTGCCTTT
TTTATATTTCTGCTCATTGCTTCAAGGAGGTTAGAGGCTGATCGATTCTTCACAACTGATTTCAATTCGCGAACCTACACAGAGAAAGGCTTTGA
ATGGGTAAACAAGACAGAGACATTGAAAGATGTCATCGATCGATACTTCCCTGAAATGACAGAGAAATACATGAGATGCACAAGTGCATTCTCAG
TGTGGAGTTCAGATCCAGATCCTAAACACTACTTACCTCTTTATCTGAGACCAGCAACCTAATGGTAGTACTATATTTGGTGATCAACTTTGTAT
GGGGTGATTATGTTAAAACAATGGTAAGTTTGCAAGGAAAATACAAACAACCCTAGTTTACGGTCAGATGAATAAACCTTGTATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286829] | SGN-U569126 | Tomato 200607 | Build 2 | 27 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100650 [Download][View] | Facility Assigned ID: TPSCC10TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0130 | Quality Trim Threshold: 12.5 |
Working
