EST details — SGN-E286941
| Search information |
| Request: 286941 | Match: SGN-E286941 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78716 | Clone name: cLES-6-I23 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184661 is on microarray TOM1: SGN-S1-1-6.2.14.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184661 [TUS-45-F19] | Trace: SGN-T198686 | EST: SGN-E397360 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184661 [TUS-45-F19] | Trace: SGN-T200042 | EST: SGN-E398716 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286941 | Length: 549 bp (1155 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286941 [] (trimmed)
AATACATCAACATAATAATCATAAAGTAAATGAATCAGTGAATATGTTACAAGGCTAGAACTGTTTGTGGAAGGAGTATATGGATCTCTCCCATG
AATCACTCATTACAAGGATATAACTTCAGCTAATAACATCGATAGAACAGCTACATACAAAATGTACTCTTAAGACACAAGAGGAATAGACAATC
AGAGGTTTGCATATATCTTTGACAAAATTAAATCAACAGGAAAGATCTCGGTAAGGGATCATATCCTGACTATGCATTTCAATGAGAATTTGCAG
TACCACCAACAGAAAGTACAATTGAGGAATTCTTCCTCTTATTCAGATGAGGCTCTGAGAGAATTTTCAATGAAAAAAGCTTGAGAGATTCACCT
TATTTTTGAGTTTGCTCCACTTTAGCTCGGATTTTCTGTTCCAATACAGATATATCTGTCTCGAGGCTGAACATCCTATTTAGAGCATGCATATT
CTCAAGGGTCTCACTCAATGTGCGGCTGTCACTCCCATCACATCTTAAGTGTTGCATGGGACCATGAAGGAGCT
AATCACTCATTACAAGGATATAACTTCAGCTAATAACATCGATAGAACAGCTACATACAAAATGTACTCTTAAGACACAAGAGGAATAGACAATC
AGAGGTTTGCATATATCTTTGACAAAATTAAATCAACAGGAAAGATCTCGGTAAGGGATCATATCCTGACTATGCATTTCAATGAGAATTTGCAG
TACCACCAACAGAAAGTACAATTGAGGAATTCTTCCTCTTATTCAGATGAGGCTCTGAGAGAATTTTCAATGAAAAAAGCTTGAGAGATTCACCT
TATTTTTGAGTTTGCTCCACTTTAGCTCGGATTTTCTGTTCCAATACAGATATATCTGTCTCGAGGCTGAACATCCTATTTAGAGCATGCATATT
CTCAAGGGTCTCACTCAATGTGCGGCTGTCACTCCCATCACATCTTAAGTGTTGCATGGGACCATGAAGGAGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286941] | SGN-U579959 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98393 [Download][View] | Facility Assigned ID: TPSAU60TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0138 | Quality Trim Threshold: 14.5 |
Working
