EST details — SGN-E287033
| Search information |
| Request: 287033 | Match: SGN-E287033 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78809 | Clone name: cLES-6-N13 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179102 is on microarray TOM1: SGN-S1-1-5.3.3.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179102 [TUS-30-O4] | Trace: SGN-T184550 | EST: SGN-E371936 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179102 [TUS-30-O4] | Trace: SGN-T184551 | EST: SGN-E371937 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287033 | Length: 660 bp (839 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287033 [] (trimmed)
GTAGCATGCGAAGTAATGGTATTCAACCAGGAGAAGAGCTGTTGCCTGACAGTGCTGCAGGGGATGGTGAGCAGTCAATAAAGCTTCTGGCTGAC
GATGATATTGTTGCACAACTTGTTTCAATGGGATTTAATCTACTTCATTGTCAGAAGGCTGCTATCAATACTTCCAACAGTGGAGTAGAGGCAGC
AATGGATTGGTTACTTAATCATATGAATGATCCAGATATTGATGCTCCTATATCAGAAAACGTGCAAAATCCTGATATTGATCAATCTAAAGTTG
ATACGCTGGTTTCATTTGGTTTCGAAGAGAAACTTGCCCATAAGGCCCTGAAGGCATCGGGAGGTGATGTTGAAAAAGCTACTGAATGGATATTC
AGCAGCCCTAGTGCCAGTACTGCAGCAGACATGGATGTTACTACCAGTAGTGGAGCTGCAGTTGATACCTTGATGCCTGATGGAGGAGGAAAATA
CAGGCTCCTGGGATTCGTGAGCCACATAGGCACATCTACCCACTGTGGCCATTATGTCGCTCATATTAACAAAGATGGCCGGTGGGTGATTTTCA
ACGATGAAAAAGTTGGGGTCTCAAAAAACCCCCCTATGGATATGGGATACCTCTACTTTTTTGAAAGACTTGAGAGTTGAACAATGGACA
GATGATATTGTTGCACAACTTGTTTCAATGGGATTTAATCTACTTCATTGTCAGAAGGCTGCTATCAATACTTCCAACAGTGGAGTAGAGGCAGC
AATGGATTGGTTACTTAATCATATGAATGATCCAGATATTGATGCTCCTATATCAGAAAACGTGCAAAATCCTGATATTGATCAATCTAAAGTTG
ATACGCTGGTTTCATTTGGTTTCGAAGAGAAACTTGCCCATAAGGCCCTGAAGGCATCGGGAGGTGATGTTGAAAAAGCTACTGAATGGATATTC
AGCAGCCCTAGTGCCAGTACTGCAGCAGACATGGATGTTACTACCAGTAGTGGAGCTGCAGTTGATACCTTGATGCCTGATGGAGGAGGAAAATA
CAGGCTCCTGGGATTCGTGAGCCACATAGGCACATCTACCCACTGTGGCCATTATGTCGCTCATATTAACAAAGATGGCCGGTGGGTGATTTTCA
ACGATGAAAAAGTTGGGGTCTCAAAAAACCCCCCTATGGATATGGGATACCTCTACTTTTTTGAAAGACTTGAGAGTTGAACAATGGACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287033] | SGN-U574813 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98485 [Download][View] | Facility Assigned ID: TPSAW79TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |
Working
