EST details — SGN-E287163
| Search information |
| Request: 287163 | Match: SGN-E287163 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78656 | Clone name: cLES-6-F23 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179048 is on microarray TOM1: SGN-S1-1-3.4.2.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179048 [TUS-30-L22] | Trace: SGN-T184881 | EST: SGN-E372089 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179048 [TUS-30-L22] | Trace: SGN-T184882 | EST: SGN-E372090 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287163 | Length: 679 bp (829 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287163 [] (trimmed)
TTTTCCCGTCTGTGTATTATAAAATAATGAGCCGACATCCTACTATCAAGTGGGCTCAGAGGTCTGACAAGTTGTTTATTACGGTGGAGTTACCA
GATGCCAAGAATGTGAAGCTGAAACTGGAACCAGAAGGAAAATTCTTATTCTCTGCAACTGCAGGAGCTGATAATGTACCTTATGAAGTGGATCT
TGATCTGTTTGATAAAATTAATGTTGATGAGAGCAAAAGTAGTACTACCTCTAGAAGTATCGTGTATCTAGTGAAGAAGGCGGAAGACAAGGGGT
GGAGCAGACTGGTAAAGCAGGAGGGATTACGTCCGGTGTTTTTGAAAGTTGATTGGGACAAATGGGTTGATGAAGATGAAGAAGACAGTAAACCT
GAGCCAGATATGGATTTTGGTGACATGGACTTCTCGAAACTCAATATGGGAGAAGGTCCTAGCAATTTTGATGTTGATGTGCCTGAGGGCGATGA
TGACAGTGACACTGAAGAAATTGAGGAAGAAGAGAACTCTGAACCCAAGGCAGCAGTGCCTCCAAGCACCGAACCCGGAGTGAAAGCTTGACGCA
TTCCAGTGTTTGTAACATTGAAAACTTTTTAACTGCTTGCTTGAGTTTGAGTGTGGTACATTCTTCTAGCAATGGTTAGAGCTGTAGTGCAAGAA
ATGTTTGATGATCA
GATGCCAAGAATGTGAAGCTGAAACTGGAACCAGAAGGAAAATTCTTATTCTCTGCAACTGCAGGAGCTGATAATGTACCTTATGAAGTGGATCT
TGATCTGTTTGATAAAATTAATGTTGATGAGAGCAAAAGTAGTACTACCTCTAGAAGTATCGTGTATCTAGTGAAGAAGGCGGAAGACAAGGGGT
GGAGCAGACTGGTAAAGCAGGAGGGATTACGTCCGGTGTTTTTGAAAGTTGATTGGGACAAATGGGTTGATGAAGATGAAGAAGACAGTAAACCT
GAGCCAGATATGGATTTTGGTGACATGGACTTCTCGAAACTCAATATGGGAGAAGGTCCTAGCAATTTTGATGTTGATGTGCCTGAGGGCGATGA
TGACAGTGACACTGAAGAAATTGAGGAAGAAGAGAACTCTGAACCCAAGGCAGCAGTGCCTCCAAGCACCGAACCCGGAGTGAAAGCTTGACGCA
TTCCAGTGTTTGTAACATTGAAAACTTTTTAACTGCTTGCTTGAGTTTGAGTGTGGTACATTCTTCTAGCAATGGTTAGAGCTGTAGTGCAAGAA
ATGTTTGATGATCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287163] | SGN-U575907 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98615 [Download][View] | Facility Assigned ID: TPSAW36TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |
Working
