EST details — SGN-E287206
| Search information |
| Request: 287206 | Match: SGN-E287206 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78650 | Clone name: cLES-6-F18 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185470 is on microarray TOM1: SGN-S1-1-5.4.9.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185470 [TUS-47-H12] | Trace: SGN-T192668 | EST: SGN-E391342 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185470 [TUS-47-H12] | Trace: SGN-T197690 | EST: SGN-E396364 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287206 | Length: 592 bp (843 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287206 [] (trimmed)
AAAATATTAAACTTGAGTTATATTAATCAACCCAAAATTAACAACTTTCAGCAACATTCAATTATAACATCAAATAAACCCAAAAATTCAGAGAT
GTCAAAAACCCTAATAAACCAAAAACGTACTGATATAACCTCTCTTCAGCAGAGATAGAAGAAAGATGACTTTAAATCTAATCAATAGTCTGCAT
GACCTCCTCAGCAGTGAACTTTGTACCCTTATCCTTGTCAGCAGCAGCACGACCCTTAGCCTTACGATCCAACAAAGACTTACGATCCTTATCGA
GTCTGAGTTTGGTAACAACAACCTTAGATGGATTAATGCCAACATTAACAGTAGATCCGTTAACCTTCTCTCTAGTTATACGTTCAATGTGAATA
ACCCATTTCTTACGGTACACTTGCATAACTTTTCCTTCACGGCCCTTGTAGGTTCCTCTTACTACTTGAACTTCATCGTCTTTCCTTACCGGGAT
AGATCTGACGTTGTACTTGGCACGTAACTCAGATGAAAGCGGTGCGCTCATCAACACCCTGCGAACGCTTGATGGAGCAGTGAAATGGGCCTTTC
TGCTCTTGCGGCGAGATGAGGA
GTCAAAAACCCTAATAAACCAAAAACGTACTGATATAACCTCTCTTCAGCAGAGATAGAAGAAAGATGACTTTAAATCTAATCAATAGTCTGCAT
GACCTCCTCAGCAGTGAACTTTGTACCCTTATCCTTGTCAGCAGCAGCACGACCCTTAGCCTTACGATCCAACAAAGACTTACGATCCTTATCGA
GTCTGAGTTTGGTAACAACAACCTTAGATGGATTAATGCCAACATTAACAGTAGATCCGTTAACCTTCTCTCTAGTTATACGTTCAATGTGAATA
ACCCATTTCTTACGGTACACTTGCATAACTTTTCCTTCACGGCCCTTGTAGGTTCCTCTTACTACTTGAACTTCATCGTCTTTCCTTACCGGGAT
AGATCTGACGTTGTACTTGGCACGTAACTCAGATGAAAGCGGTGCGCTCATCAACACCCTGCGAACGCTTGATGGAGCAGTGAAATGGGCCTTTC
TGCTCTTGCGGCGAGATGAGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287206] | SGN-U578367 | Tomato 200607 | Build 2 | 72 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98658 [Download][View] | Facility Assigned ID: TPSAX33TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 12.5 |
Working
