EST details — SGN-E287219
| Search information |
| Request: 287219 | Match: SGN-E287219 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78768 | Clone name: cLES-6-L16 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179087 is on microarray TOM1: SGN-S1-1-4.2.2.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179087 [TUS-30-N13] | Trace: SGN-T184802 | EST: SGN-E372362 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179087 [TUS-30-N13] | Trace: SGN-T184803 | EST: SGN-E372363 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287219 | Length: 600 bp (846 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287219 [] (trimmed)
CAGGCAAGGTCCATCATTTGAGATATATATATTTTTATTATTTAAATCTTTCATGTCCCAATTTTTGTTTTTATTTTTTAGCAAAATCTCACTTA
AGTTTTATCCTCTTCATATTGTTCAAATTATAAGCTAGAGGTGGACCCTAGGAGTGATCAAATTATTCAGTGAAGATTTGAGTTTGCATGGATTT
GTGAATAGTCAAAATTTTAGGGTTGTATAAAAAACAAACAAAAAGAAAGAAAAAAAAAACTATAACAAGACAATGGAGAAAGAAGAAAATTGCCA
GGCTAATAATACTTTGCCTACATCTTTTCAAATGGCAATTATTGGTGAATCTTCATCAAATAATACTAATAATCAAATGGTTGATTATATGGTAG
ATTCACAATCTATACAACAACAACAACATAACCAGAGTTCGTTAGGGTTTTTACCCTCGAACCCTTCTCTAGACAAGTTGAGCTTTGCTGATGTG
ATGCAATTCGCGGATTTTGGGCCTAAATTAGCCTTAAATCAAACCAAGGTATTGGAACAAGATGTTGGGATTGATGATCCTGTGTACTTCCTCAA
GTTTCCCGTTTTGAACGAGAAGAAGAATGA
AGTTTTATCCTCTTCATATTGTTCAAATTATAAGCTAGAGGTGGACCCTAGGAGTGATCAAATTATTCAGTGAAGATTTGAGTTTGCATGGATTT
GTGAATAGTCAAAATTTTAGGGTTGTATAAAAAACAAACAAAAAGAAAGAAAAAAAAAACTATAACAAGACAATGGAGAAAGAAGAAAATTGCCA
GGCTAATAATACTTTGCCTACATCTTTTCAAATGGCAATTATTGGTGAATCTTCATCAAATAATACTAATAATCAAATGGTTGATTATATGGTAG
ATTCACAATCTATACAACAACAACAACATAACCAGAGTTCGTTAGGGTTTTTACCCTCGAACCCTTCTCTAGACAAGTTGAGCTTTGCTGATGTG
ATGCAATTCGCGGATTTTGGGCCTAAATTAGCCTTAAATCAAACCAAGGTATTGGAACAAGATGTTGGGATTGATGATCCTGTGTACTTCCTCAA
GTTTCCCGTTTTGAACGAGAAGAAGAATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287219] | SGN-U563991 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98671 [Download][View] | Facility Assigned ID: TPSAX68TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.934 | Expected Error Rate: 0.0043 | Quality Trim Threshold: 14.5 |
Working
