EST details — SGN-C28744
| Search information |
| Request: 28744 | Match: SGN-C28744 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C28744 | Clone name: cLEF-49-B19 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176959 is on microarray TOM1: SGN-S1-1-4.1.8.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176959 [TUS-25-E21] | Trace: SGN-T181659 | EST: SGN-E369797 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176959 [TUS-25-E21] | Trace: SGN-T181660 | EST: SGN-E369798 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248901 | Length: 555 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248901 [] (trimmed)
AATGGCAATAAGTTAGCCTTGGAGAGAAGAGAGAAGGAAGCCATTGATGGCGAACAAGCTCCTCAGCGAAATGGGTCTTCCCAACTCCATAGCCA
ACATTTTTGTTGCTCGTAACCTTATTACTGCTAAAGACGTATTTTCACTGACAGAATTTGAGTTGATGGAATTGCTAGATGTGGATTTGGCTGTA
GTAACATCAGCGATGGCACACATCAGTGAAATTACATGCCCTCCGTACCAAACTGCACTGTCATTGTTGGAACAGCGTGGTCAAAATGAGAACAT
GGCTGGCCATCTTCCAACTTCTCTAAAAAGACTCGACAATGCTCTGTGTGGTGGACTTCCTTTTGGTGTTGTGACAGAGCTAGTGGGTCCAGCAA
GCATTGGTAAAACCCAGTTCTGCTTGAAGCTTTCGTTACTAGCTTCTCTTCCTTCGAGTTATGGCGGCTTAGATGGTTCCGTAGTTTATATCGAT
ACAGAATCCAAATTTAGTTCACGGAGGATGATAGAAATAGGATTTCATAGCTTCCCAGAAGTATTTCATACAAAAAGGAT
ACATTTTTGTTGCTCGTAACCTTATTACTGCTAAAGACGTATTTTCACTGACAGAATTTGAGTTGATGGAATTGCTAGATGTGGATTTGGCTGTA
GTAACATCAGCGATGGCACACATCAGTGAAATTACATGCCCTCCGTACCAAACTGCACTGTCATTGTTGGAACAGCGTGGTCAAAATGAGAACAT
GGCTGGCCATCTTCCAACTTCTCTAAAAAGACTCGACAATGCTCTGTGTGGTGGACTTCCTTTTGGTGTTGTGACAGAGCTAGTGGGTCCAGCAA
GCATTGGTAAAACCCAGTTCTGCTTGAAGCTTTCGTTACTAGCTTCTCTTCCTTCGAGTTATGGCGGCTTAGATGGTTCCGTAGTTTATATCGAT
ACAGAATCCAAATTTAGTTCACGGAGGATGATAGAAATAGGATTTCATAGCTTCCCAGAAGTATTTCATACAAAAAGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248901] | SGN-U566334 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62409 [Download][View] | Facility Assigned ID: TMGHM10TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 14.5 |
Working
