EST details — SGN-E288857

Search information 
Request: 288857Match: SGN-E288857
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C76183Clone name: cLES-17-D20
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185551 is on microarray TOM1: SGN-S1-1-4.3.9.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185551 [TUS-47-K21] Trace: SGN-T192087 EST: SGN-E390761 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E288857Length: 497 bp (615 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E288857 [] (trimmed) CAAATATTTTACTGCAGTGCGGCGATCGTGGAACTCTGCTTGGATCTGCTGCAGAAGCTCAGCAACACGCACAGGAGTTTTGTCACACCAACTAC
TACGAGTCCCAAGAAGCCATTCGCTTTATTGTTTGCTATAATTGCGGTCACAAATGTTCCTGCGAAACCGAGAGCGTTATACATTCAAGAAAGTC
TGGGCATACTGAATTTTATGATAGGACAGCAGAGGTGACGGAAGAGGCAGCAAGAAGAAACAGAGCTAACATTCGTCAGATGCTGAGAGTAGCTA
TTGATCGTTTGGACGAGGCTGATACTTCAGAGGGAGCAAGAAGGCAGCAGCAGCAGCAGCTTGGTTTGCCTTCGAGACCTGTTTTACAGGAAGGA
CAGAGTTCATTGACTCTAGCTGCAAAGGTCGAGCAGATGGCTGAGTGCCTGCGGACTATCCAGCAGAATTCCATGGATGACGCGGCCAAAGTCAT
GCAAGCTTTCAACTCACTGCGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E288857] SGN-U568885 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T101299 [Download][View] Facility Assigned ID: TPSCP22TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0019 Quality Trim Threshold: 14.5