EST details — SGN-C28886

Search information 
Request: 28886Match: SGN-C28886
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C28886Clone name: cLEF-49-I16
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C177041 is on microarray TOM1: SGN-S1-1-2.1.8.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177041 [TUS-25-I7] Trace: SGN-T181674 EST: SGN-E369812 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E248883Length: 599 bp (911 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E248883 [] (trimmed) CTGCAGGTTTTTCTTCTCTTTCTCGCTCATCCTGTTCTCGATTGCTCTGCTTGGTTTCATTGGTTGAAGCTAGTCTGCTTTCTGTACAGTTTCGA
AGTTGTTGTCTAAGTGAAACTTCTTTTATGTCCGAACAAGCCATCTTCTATTTGGGATCCATTGGATTGCTTGGAGAGTATTGTCCTTGGTCAAG
AAAAAAGAACCGTCATTTCTCTGGTCAGGTTGACTGTATGCATCTCGAATCATTCAAAGAAGAACACTTCGACTTTTCTGGTTGTTGGAAGGCAC
AACTGGCACTTAGCAATTGCGCTGCTGTAGAATTCTCTGAACATTCCTAACATTCCATCCAGTAAATTCTTAATCAAATATGGCTTTGCAAAACA
TAGGTGCCAGCAACAGAGATGATGCTTTCTACAGGTATAAGATGCCCAGGATGCTTACCAAGATAGAGGGCCGTGGGAATGGTATCAAAACAAAT
GTGGTGAACATGGTTGATATTGCCAAAGCATTAGCAAGGCCCCCGTCCTACACAACAAAATATTTTGGAAATGAGCTTGGGGCTCAGTCGAAATT
TGATGAAAAAATTTGAACTGCCCTTGTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E248883] SGN-U578428 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T62391 [Download][View] Facility Assigned ID: TMGHL56TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0105 Quality Trim Threshold: 14.5