EST details — SGN-E289173

Search information 
Request: 289173Match: SGN-E289173
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C76492Clone name: cLES-18-D16
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C179142 is on microarray TOM1: SGN-S1-1-5.4.2.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179142 [TUS-30-P20] Trace: SGN-T184992 EST: SGN-E372200 Direction: 3' Facility: INRA
Clone: SGN-C179142 [TUS-30-P20] Trace: SGN-T184993 EST: SGN-E372201 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E289173Length: 434 bp (939 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E289173 [] (trimmed) CACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGG
GTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTT
TTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGA
AGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGAT
TAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E289173] SGN-U576498 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T101615 [Download][View] Facility Assigned ID: TPSCT20TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0083 Quality Trim Threshold: 14.5