EST details — SGN-E289287
| Search information |
| Request: 289287 | Match: SGN-E289287 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C76493 | Clone name: cLES-18-D17 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179147 is on microarray TOM1: SGN-S1-1-8.1.2.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179147 [TUS-31-A1] | Trace: SGN-T1523 | EST: SGN-E378397 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C179147 [TUS-31-A1] | Trace: SGN-T184995 | EST: SGN-E372538 | Direction: 5' | Facility: INRA |
| Clone: SGN-C179147 [TUS-31-A1] | Trace: SGN-T185084 | EST: SGN-E372627 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289287 | Length: 482 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289287 [] (trimmed)
ACGATAACAAACATTTGTATAAAATAATATTATGTGTGTTCAAAATCTGTAGATAGAAAGTCAAAATCATATACTTCCGATGCAAAATATGAAAA
GAAACATATCAATTATTCTTAAGAGGAACATTTGCTTCATGTAGTATGTTTTTGTTTCAGATCCGTATACTCTTCTCTTCTTTTATATCTCGGTA
GCTCGATAGTATGCTTGATGAGAGCTCAGTAGTTTTCTCTCGTCCATAAAAGAGTGCAAACCTGTTATGCAATAACCAATAGTCCAAAGATACTT
GGTAATTGGGAACAAATGAGATACACTGGATTTATCCAATAACTTGCCTGATCAGCCAAAATACACAACTTCAAACTCCATGCAACTCAAAATTT
CCTAAATAACAGGTCTACTTTTAAGAACATTAAGTTAAAATAAAAAAGGATATAACAGAACAAAACTACAACACTATCTAATCAATATATTCAAA
ACAATGG
GAAACATATCAATTATTCTTAAGAGGAACATTTGCTTCATGTAGTATGTTTTTGTTTCAGATCCGTATACTCTTCTCTTCTTTTATATCTCGGTA
GCTCGATAGTATGCTTGATGAGAGCTCAGTAGTTTTCTCTCGTCCATAAAAGAGTGCAAACCTGTTATGCAATAACCAATAGTCCAAAGATACTT
GGTAATTGGGAACAAATGAGATACACTGGATTTATCCAATAACTTGCCTGATCAGCCAAAATACACAACTTCAAACTCCATGCAACTCAAAATTT
CCTAAATAACAGGTCTACTTTTAAGAACATTAAGTTAAAATAAAAAAGGATATAACAGAACAAAACTACAACACTATCTAATCAATATATTCAAA
ACAATGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289287] | SGN-U565094 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101729 [Download][View] | Facility Assigned ID: TPSCS21TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.934 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 14.5 |
Working
