EST details — SGN-E289361
| Search information |
| Request: 289361 | Match: SGN-E289361 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C76701 | Clone name: cLES-18-N22 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179213 is on microarray TOM1: SGN-S1-1-6.3.2.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179213 [TUS-31-C19] | Trace: SGN-T1525 | EST: SGN-E378286 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C179213 [TUS-31-C19] | Trace: SGN-T185103 | EST: SGN-E372646 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179213 [TUS-31-C19] | Trace: SGN-T185104 | EST: SGN-E372647 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289361 | Length: 402 bp (946 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289361 [] (trimmed)
GAGAACTGCGGGGGTACATTGGCTCCGTTGCCTTCTCCATCCTCAGTTATGGAATGCAATGTTTGTGGTAATTTGAGCAAATCTGATGAGCTATA
AGGTTTGCGCTGGGGACTATTGAATCTTAGTGAATGGAAAGATTTGCAAAGACCCGAAGCTTGCAAAAGCGGATGATTTCTTTGCTTCAGGTCTT
AACGTTAGTGGAAATGCAGTGCCTCAGTTAGGCTTTGCTGTAAATATTGTGGATGTAAACAAGATGCCTGGACTCAACACTCTTGGTATTTCTAT
AGTTCGTGCTGATTTGGAACCACAGGGTCTCTCTCCACTTCACACGCACCCTCGAGCTACTGAGCTTATAACTATCCTAGAGGGTACTATCTATG
CAGGATTTTTTGCCCCTGATGC
AGGTTTGCGCTGGGGACTATTGAATCTTAGTGAATGGAAAGATTTGCAAAGACCCGAAGCTTGCAAAAGCGGATGATTTCTTTGCTTCAGGTCTT
AACGTTAGTGGAAATGCAGTGCCTCAGTTAGGCTTTGCTGTAAATATTGTGGATGTAAACAAGATGCCTGGACTCAACACTCTTGGTATTTCTAT
AGTTCGTGCTGATTTGGAACCACAGGGTCTCTCTCCACTTCACACGCACCCTCGAGCTACTGAGCTTATAACTATCCTAGAGGGTACTATCTATG
CAGGATTTTTTGCCCCTGATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289361] | SGN-U575172 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101803 [Download][View] | Facility Assigned ID: TPSCT83TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0108 | Quality Trim Threshold: 14.5 |
Working
