EST details — SGN-E290316
| Search information |
| Request: 290316 | Match: SGN-E290316 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77218 | Clone name: cLES-20-E7 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184615 is on microarray TOM1: SGN-S1-1-4.4.14.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184615 [TUS-45-D21] | Trace: SGN-T198668 | EST: SGN-E397342 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184615 [TUS-45-D21] | Trace: SGN-T200039 | EST: SGN-E398713 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290316 | Length: 567 bp (844 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290316 [] (trimmed)
AAAACACAGAAAAATGTCTCAAGCAGCGGAGGAAGACAAGAAGCCCGGCGGCGATCAAGTTCACATCAATCTCAAAGTCAAAAGTCAGGACGGGA
ATGAAGTCTTCTTTAGGATCAAAAGAAGCACCCAGCTAAAGAAACTCATGAATGCGTATTGTGACCGGCAGTCTGTGGATTTTAATTCAATTGCA
TTCTTGTTTGATGGTCGCCGTCTTCGAGGAGAGCAGACTCCAGATGAGCTGGAGATGGAGGATGGCGATGAAATTGATGCAATGTTGCATCAAAC
TGGAGGCTCAACTATTTGAGGCGTCCCATCTCTTTTGTTTCTAGGTTGTAGACTTTAATGAATGTAGCTTGTGCTACTCTAAGTACTGTAGAAGC
ATATATGTGGTTTCGTCTTATGTTTAACCGTAGCTACGTATTGCTTACTGTTGCAAGAAGATTTCCAGTTGCTTCTTGTCGTCAAGTTTAAGTGT
TGCCTGTCTCCTCAATAACTGAGATACTGTGAATCTCATGTATTTTGTTGTAACTAGACACCATGAGAAACAAGAATCTTGTTCGATATGTG
ATGAAGTCTTCTTTAGGATCAAAAGAAGCACCCAGCTAAAGAAACTCATGAATGCGTATTGTGACCGGCAGTCTGTGGATTTTAATTCAATTGCA
TTCTTGTTTGATGGTCGCCGTCTTCGAGGAGAGCAGACTCCAGATGAGCTGGAGATGGAGGATGGCGATGAAATTGATGCAATGTTGCATCAAAC
TGGAGGCTCAACTATTTGAGGCGTCCCATCTCTTTTGTTTCTAGGTTGTAGACTTTAATGAATGTAGCTTGTGCTACTCTAAGTACTGTAGAAGC
ATATATGTGGTTTCGTCTTATGTTTAACCGTAGCTACGTATTGCTTACTGTTGCAAGAAGATTTCCAGTTGCTTCTTGTCGTCAAGTTTAAGTGT
TGCCTGTCTCCTCAATAACTGAGATACTGTGAATCTCATGTATTTTGTTGTAACTAGACACCATGAGAAACAAGAATCTTGTTCGATATGTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290316] | SGN-U578721 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101995 [Download][View] | Facility Assigned ID: TPSCY28TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0145 | Quality Trim Threshold: 12.5 |
Working
