EST details — SGN-E290476
| Search information |
| Request: 290476 | Match: SGN-E290476 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77410 | Clone name: cLES-20-N22 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179349 is on microarray TOM1: SGN-S1-1-6.1.2.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179349 [TUS-31-I11] | Trace: SGN-T185131 | EST: SGN-E372674 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179349 [TUS-31-I11] | Trace: SGN-T185132 | EST: SGN-E372675 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290476 | Length: 534 bp (882 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290476 [] (trimmed)
GTTCGCGTGAAGTTTTGCCGATTGGAAAAATGTCTAGCGCAGTGGATGCTGTTGGAAATCCGATCCCAACATCGGCGGTGCTGATGTCGGCGTCG
AAGCACATAGATATTAGGTGCCGGAACGAGAATGTAGCATATCTCAAGTGCAAGAAGGACGATCCAAACCCGGAGAAATGCCTCCAAAAAGGTCA
ACAAGTCACTCGCTGTGTTCTTAGCCTGTTGAAGGATCTTCATCAGAGGTGTAACAAAGAGATGGATGCTTATGCTGGATGCATGTACTACAACA
CAAATGAGTTTGAGATGTGTCGTAATGAGCAGAAGGATTTTGAGAAAGCCTGTCCTTATTGACTCGACTGGCGAATGATGTTTTTCATTTAAGAA
ATAAAAACTTGAATGTATTTTGCAAACAGAGAAGAGCATATTGTTGTTAGCTACCTTTCATCAATATGTTTGTGTTTGGAACCCTTTCACAGGGC
ACTTGCCAATTTGATGTTACTCTTAAATTTGTCTTCAGTATAAATCATGAAGCAGAAAT
AAGCACATAGATATTAGGTGCCGGAACGAGAATGTAGCATATCTCAAGTGCAAGAAGGACGATCCAAACCCGGAGAAATGCCTCCAAAAAGGTCA
ACAAGTCACTCGCTGTGTTCTTAGCCTGTTGAAGGATCTTCATCAGAGGTGTAACAAAGAGATGGATGCTTATGCTGGATGCATGTACTACAACA
CAAATGAGTTTGAGATGTGTCGTAATGAGCAGAAGGATTTTGAGAAAGCCTGTCCTTATTGACTCGACTGGCGAATGATGTTTTTCATTTAAGAA
ATAAAAACTTGAATGTATTTTGCAAACAGAGAAGAGCATATTGTTGTTAGCTACCTTTCATCAATATGTTTGTGTTTGGAACCCTTTCACAGGGC
ACTTGCCAATTTGATGTTACTCTTAAATTTGTCTTCAGTATAAATCATGAAGCAGAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290476] | SGN-U577174 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102155 [Download][View] | Facility Assigned ID: TPSDB83TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0017 | Quality Trim Threshold: 12.5 |
Working
