EST details — SGN-E290621
| Search information |
| Request: 290621 | Match: SGN-E290621 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77269 | Clone name: cLES-20-H12 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179293 is on microarray TOM1: SGN-S1-1-6.3.2.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179293 [TUS-31-G3] | Trace: SGN-T185030 | EST: SGN-E372573 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179293 [TUS-31-G3] | Trace: SGN-T185031 | EST: SGN-E372574 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290621 | Length: 603 bp (877 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290621 [] (trimmed)
CTGTCATGGCCTTCCCAACCCATCATTCCAACCATGCAACCACAGCTGGTCAATTCTATCCTGCCTGGATACCACCAGGAGGTTACCCGAATGGT
GCACATATGTGGAATTCGCCTTATTATCATGGATGGCAACCGCCTGAGACGTGGCACTGGAATCCTCAACCAGGGCTGTATGCTGATGTATGGGG
TTGCCCCGTTACGCCTCCATCTTTAGGATCATGTACACCATACCCTCAGAATGCATCTGGATTTCACAGGGCTGAGGGAATGCTGAATGGATATA
GCATAATACAGAAATCAGTCGATCTTCACCCGGCAGAGGAGGTGATAGATAAAGTGGTGAAGGAGGCAATAAACAAGCCATGGTTGCCTCTACCC
TTGGGCCTAAAACCTCCTTCAACGGAGAGTGTTCTCGACGCGCTTTCTAAACAAGGCATCCCCGCCGTCCCTCCACGCCACCACCGCTCTCATCG
CCCACACTGACATGCCAATTGCTTACCGGGAATCCCATATACGGAGGCTCGTGTTTGAACACTCCACCCATGCGCGTGGCGATGACTTCACCCGA
CACGAAAGAAAAAAAGTAGATCCTTTAACTGAT
GCACATATGTGGAATTCGCCTTATTATCATGGATGGCAACCGCCTGAGACGTGGCACTGGAATCCTCAACCAGGGCTGTATGCTGATGTATGGGG
TTGCCCCGTTACGCCTCCATCTTTAGGATCATGTACACCATACCCTCAGAATGCATCTGGATTTCACAGGGCTGAGGGAATGCTGAATGGATATA
GCATAATACAGAAATCAGTCGATCTTCACCCGGCAGAGGAGGTGATAGATAAAGTGGTGAAGGAGGCAATAAACAAGCCATGGTTGCCTCTACCC
TTGGGCCTAAAACCTCCTTCAACGGAGAGTGTTCTCGACGCGCTTTCTAAACAAGGCATCCCCGCCGTCCCTCCACGCCACCACCGCTCTCATCG
CCCACACTGACATGCCAATTGCTTACCGGGAATCCCATATACGGAGGCTCGTGTTTGAACACTCCACCCATGCGCGTGGCGATGACTTCACCCGA
CACGAAAGAAAAAAAGTAGATCCTTTAACTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290621] | SGN-U582998 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102300 [Download][View] | Facility Assigned ID: TPSDB42TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 14.5 |
Working
