EST details — SGN-E292088
| Search information |
| Request: 292088 | Match: SGN-E292088 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82263 | Clone name: cLET-1-G3 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179451 is on microarray TOM1: SGN-S1-1-8.1.2.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82263 [cLET-1-G3] | Trace: SGN-T102363 | EST: SGN-E292089 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C179451 [TUS-31-M17] | Trace: SGN-T185069 | EST: SGN-E372612 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179451 [TUS-31-M17] | Trace: SGN-T185070 | EST: SGN-E372613 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292088 | Length: 480 bp (554 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292088 [] (trimmed)
TTTTTTTCCTGTTTGTTCCTGCATTAGATATGTATTTGTATTTCTTTTATTGTAACATTACTTGTATGTTTATACATATTCGGGAGTGACTATGT
TCGTTTTGATGTAAATAAAAGTTCTTTGCGTTTTAATTTATTTGTCTTGTTTTGACTTGATATAGAAGATTTTGAGATTTGAAGGTAAAAAAAAA
GTTTGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCCTCAGGCATGGGTCCGTATCATCGGATTCGACA
ATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAGGATACTAAAATGCCAATTTTTAATTATGTAATGTATAACTGACCCTA
TGTATTTAGGGGAAGCTTGTTTGAATCCTCCTTAAAGTTTTTCTCTGGAGAAACTGTAGTAATTTTACTTTGTTGTGTTCCCTTCATCTTTTGAA
TTAAT
TCGTTTTGATGTAAATAAAAGTTCTTTGCGTTTTAATTTATTTGTCTTGTTTTGACTTGATATAGAAGATTTTGAGATTTGAAGGTAAAAAAAAA
GTTTGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCCTCAGGCATGGGTCCGTATCATCGGATTCGACA
ATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAGGATACTAAAATGCCAATTTTTAATTATGTAATGTATAACTGACCCTA
TGTATTTAGGGGAAGCTTGTTTGAATCCTCCTTAAAGTTTTTCTCTGGAGAAACTGTAGTAATTTTACTTTGTTGTGTTCCCTTCATCTTTTGAA
TTAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292088] | SGN-U580380 | Tomato 200607 | Build 2 | 55 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102362 [Download][View] | Facility Assigned ID: TMEAA38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.932 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 14.5 |
Working
