EST details — SGN-E292156
| Search information |
| Request: 292156 | Match: SGN-E292156 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82172 | Clone name: cLET-1-C16 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C183515 is on microarray TOM1: SGN-S1-1-8.3.2.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183515 [TUS-42-G1] | Trace: SGN-T194931 | EST: SGN-E393605 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183515 [TUS-42-G1] | Trace: SGN-T194931 | EST: SGN-E399146 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183515 [TUS-42-G1] | Trace: SGN-T195483 | EST: SGN-E394157 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183515 [TUS-42-G1] | Trace: SGN-T195948 | EST: SGN-E394622 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183515 [TUS-42-G1] | Trace: SGN-T200239 | EST: SGN-E399147 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292156 | Length: 577 bp (881 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292156 [] (trimmed)
CTGCCGTGTCGCCGCCGCCTAATCTGAAAGGCGCCTTGACAATCATTGATGAGAGGACCGGTAAGAAGTATCAGGTTCCGGTTACCGAGGAAGGA
ACTGTTAAAGCTACCGACTTTAAGAAAATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAACACTGCACCCGT
TCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATTGAAGAGTTGGCTGAGAGAAGTTCCTTCTTAG
AAGTGGCTTATCTTTTAATGTATGGTAATTTACCATCTGAGAACCAATTATCAGACTGGGAGTTTGCAGTTTCACATCATTCAGCAGTTCCTCAG
GGAGTTTTGGATATCATACAGTCAATGCCTCATGATGCTCACCCGATGGGTGTTCTTGTTAGTGCTATGAGCACCCTATCTGTCTTTCATCCTGA
TGCCAATCCAGCTCTTAGGGGCCAAGATATATACAATTCAAAACAAGTGAGGGATAAACAAATAGTTCGCATCCTTGGAAAGGCACCTGTAATTG
CTGCAGC
ACTGTTAAAGCTACCGACTTTAAGAAAATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAACACTGCACCCGT
TCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATTGAAGAGTTGGCTGAGAGAAGTTCCTTCTTAG
AAGTGGCTTATCTTTTAATGTATGGTAATTTACCATCTGAGAACCAATTATCAGACTGGGAGTTTGCAGTTTCACATCATTCAGCAGTTCCTCAG
GGAGTTTTGGATATCATACAGTCAATGCCTCATGATGCTCACCCGATGGGTGTTCTTGTTAGTGCTATGAGCACCCTATCTGTCTTTCATCCTGA
TGCCAATCCAGCTCTTAGGGGCCAAGATATATACAATTCAAAACAAGTGAGGGATAAACAAATAGTTCGCATCCTTGGAAAGGCACCTGTAATTG
CTGCAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292156] | SGN-U573543 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102430 [Download][View] | Facility Assigned ID: TMEAB20TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.989 | Expected Error Rate: 0.0028 | Quality Trim Threshold: 14.5 |
Working
