EST details — SGN-E292184
| Search information |
| Request: 292184 | Match: SGN-E292184 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82152 | Clone name: cLET-1-B15 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179384 is on microarray TOM1: SGN-S1-1-3.2.2.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179384 [TUS-31-J22] | Trace: SGN-T185584 | EST: SGN-E373446 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179384 [TUS-31-J22] | Trace: SGN-T185585 | EST: SGN-E373447 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292184 | Length: 572 bp (879 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292184 [] (trimmed)
CTTTGATGAGTATCTCTTCTTTTCCTTTGATGCAACCCATAACCAGACCAGAAATAACTTACTCCCAGAGACATGTCAGAGTCGGAACTTCCTCT
GTCCTAAGGAATGTATCCCACAACATGAGCATGAAGAAAGTTCCACGTATGATCACCAGAGCTAGCTCAGAACCGAGTGGCAGTAGCGATGGAGC
TCTTGGACAGAATAAGACACCATTTGGATATACGAGAAAGGATGTTATATTGATTGGAGTTGGAGTTACACTTCTAGGGGTTGGCTTAAAGAGTG
GATTGGAGTTCTTGGGATTTGACCCTTTACAAGCTGGAAATGTCGTTCAATTAGTCCTGGTTTTGGGTCTAACAGTTGGATGGATCTCAACATAC
ATCTTCAGGGTTTCAAACAAGGAAATGACGTATGCTCAACAACTACGAGACTACGAAAGCAAAGTCATGGAGAAACGGTTAGAGAGCTTAACAGA
AGCGGAATTACAAGTATTGCTTGAGCAGGTTGAAGAAGAGAAGACCCGCTTGACTAGTGGTGAAGAGGTCAAATAGATATTGTTTTCCTTGTAGC
TA
GTCCTAAGGAATGTATCCCACAACATGAGCATGAAGAAAGTTCCACGTATGATCACCAGAGCTAGCTCAGAACCGAGTGGCAGTAGCGATGGAGC
TCTTGGACAGAATAAGACACCATTTGGATATACGAGAAAGGATGTTATATTGATTGGAGTTGGAGTTACACTTCTAGGGGTTGGCTTAAAGAGTG
GATTGGAGTTCTTGGGATTTGACCCTTTACAAGCTGGAAATGTCGTTCAATTAGTCCTGGTTTTGGGTCTAACAGTTGGATGGATCTCAACATAC
ATCTTCAGGGTTTCAAACAAGGAAATGACGTATGCTCAACAACTACGAGACTACGAAAGCAAAGTCATGGAGAAACGGTTAGAGAGCTTAACAGA
AGCGGAATTACAAGTATTGCTTGAGCAGGTTGAAGAAGAGAAGACCCGCTTGACTAGTGGTGAAGAGGTCAAATAGATATTGTTTTCCTTGTAGC
TA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292184] | SGN-U585476 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102458 [Download][View] | Facility Assigned ID: TMEAC08TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |
Working
