EST details — SGN-E292196
| Search information |
| Request: 292196 | Match: SGN-E292196 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82272 | Clone name: cLET-1-H11 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179457 is on microarray TOM1: SGN-S1-1-2.1.2.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179457 [TUS-31-M23] | Trace: SGN-T185073 | EST: SGN-E372616 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179457 [TUS-31-M23] | Trace: SGN-T185074 | EST: SGN-E372617 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292196 | Length: 287 bp (863 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292196 [] (trimmed)
TGGGTCTGCATCACAAGTCCAAACAGCACAACAATTAGTTCAGAATTCAATCGCTGATGCTACCAGCTCAATGCAGAACACTGCAGCTGGACCAC
CTTCCCAAGGTTATAATCCCTACCCTTCTCAGGGTCCTGTGTACTCTTCATCCACTGGTCACGCTGGTCATGCGCCATCTGCAGATTATGGTTCT
GTTTATGGAGGTAGCTACGGTTATTAAAGGATATCCCGTTCAAACCAGCACTAGAACTACGAGTCTTCAGCTGTTGGGAAATTTTAGGAGAACTA
GT
CTTCCCAAGGTTATAATCCCTACCCTTCTCAGGGTCCTGTGTACTCTTCATCCACTGGTCACGCTGGTCATGCGCCATCTGCAGATTATGGTTCT
GTTTATGGAGGTAGCTACGGTTATTAAAGGATATCCCGTTCAAACCAGCACTAGAACTACGAGTCTTCAGCTGTTGGGAAATTTTAGGAGAACTA
GT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292196] | SGN-U564926 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102470 [Download][View] | Facility Assigned ID: TMEAC42TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |
Working
