EST details — SGN-E292316
| Search information |
| Request: 292316 | Match: SGN-E292316 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82388 | Clone name: cLET-1-M19 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179549 is on microarray TOM1: SGN-S1-1-6.1.1.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82388 [cLET-1-M19] | Trace: SGN-T102410 | EST: SGN-E292136 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C179549 [TUS-32-A19] | Trace: SGN-T185711 | EST: SGN-E373048 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179549 [TUS-32-A19] | Trace: SGN-T185712 | EST: SGN-E373049 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292316 | Length: 513 bp (602 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E292316 [] (trimmed)
CATCATTAAAATAAAAGCCAATAATTATACTCTGAAAAGGTAAACGTTCAGAGCGGTAACAACTTATATAATGGTTCAGAACTAGATAGAAGATC
AAGACACAAAATTTCATTCAGCGGAAGTAGAAAGCTAAAGGTACAGATTTGTAAATTCTGCAACTTCAATTTGCAGCTTCTAGAAAAGCTCTTCC
AGGTTGACGTGCAGCAAGTCGTCCATGGCAGCCAAGAAGCTTGGCGTTCACACCGTCTGGGACAATACGATTCTCGGATTTGTATTTCAGATAAT
CGGTACGGCTGAACTTAGTGAACCCCCACTTTCTGCTGACAATAATCTTTTGTCGGCCAGGAAACTTAAACTTAGCACGGCGAAGAGCCTCTTGA
GCATGGTTAGCATTGCCATCTTTGCACCGAACCGAGAGAAGAACCTGACCAATAGCAACACGGGCACAGACTCCCTGTGGCTTACCGAAAGCTCC
TCTCATACCAGTTTGGAGCCTATCAGCCCCAGCACATG
AAGACACAAAATTTCATTCAGCGGAAGTAGAAAGCTAAAGGTACAGATTTGTAAATTCTGCAACTTCAATTTGCAGCTTCTAGAAAAGCTCTTCC
AGGTTGACGTGCAGCAAGTCGTCCATGGCAGCCAAGAAGCTTGGCGTTCACACCGTCTGGGACAATACGATTCTCGGATTTGTATTTCAGATAAT
CGGTACGGCTGAACTTAGTGAACCCCCACTTTCTGCTGACAATAATCTTTTGTCGGCCAGGAAACTTAAACTTAGCACGGCGAAGAGCCTCTTGA
GCATGGTTAGCATTGCCATCTTTGCACCGAACCGAGAGAAGAACCTGACCAATAGCAACACGGGCACAGACTCCCTGTGGCTTACCGAAAGCTCC
TCTCATACCAGTTTGGAGCCTATCAGCCCCAGCACATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292316] | SGN-U578637 | Tomato 200607 | Build 2 | 198 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102590 [Download][View] | Facility Assigned ID: TMEAA82TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0022 | Quality Trim Threshold: 14.5 |
Working
