EST details — SGN-E292318
| Search information |
| Request: 292318 | Match: SGN-E292318 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82393 | Clone name: cLET-1-M23 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179551 is on microarray TOM1: SGN-S1-1-4.1.1.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82393 [cLET-1-M23] | Trace: SGN-T102412 | EST: SGN-E292138 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C179551 [TUS-32-A21] | Trace: SGN-T185800 | EST: SGN-E373137 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179551 [TUS-32-A21] | Trace: SGN-T185801 | EST: SGN-E373138 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292318 | Length: 606 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292318 [] (trimmed)
CTTGTAAGTTTGAGAAACGTCTAGTCTAGAGAGAAATGGCAAATCCAAAGGTTTTCTTTGACCTTACCATCGGTGGTGCACCAGCTGGTCGTGTG
GTGATGGAGCTCTTCGCCGATACCACTCCCAAAACCGCTGAGAACTTCCGAGCTCTTTGTACCGGTGAGAAAGGTGTTGGAAAGATGGGGAAGCC
TTTGCACTACAAGGGCTCAACCTTCCACCGTGTGATCCCAGGGTTCATGTGTCAAGGAGGTGATTTCACCGCCGGAAACGGGACCGGAGGAGAGT
CGATCTATGGAGCCAAATTCAACGATGAGAACTTCGTTAAGAAGCACACCGGCCCTGGAATCCTCTCCATGGCTAATGCTGGACCTGGAACCAAC
GGTTCTCAGTTTTTCATCTGTACCGCTAAGACTGAGTGGCTCAACGGAAAGCACGTCGTGTTTGGACAAGTTGTTGAAGGCATGGATGTGATTAA
GAAGGCAGAGGCTGTTGGATCTAGCTCTGGAAGGTGCTCCAAGCCTGTGGTTATTGCTGACTGCGGTCAACTCTAGATCTGATGATGATGATGAT
CTAGTTTTATCAGGCTTTTATGTATTTGAGTCGCCG
GTGATGGAGCTCTTCGCCGATACCACTCCCAAAACCGCTGAGAACTTCCGAGCTCTTTGTACCGGTGAGAAAGGTGTTGGAAAGATGGGGAAGCC
TTTGCACTACAAGGGCTCAACCTTCCACCGTGTGATCCCAGGGTTCATGTGTCAAGGAGGTGATTTCACCGCCGGAAACGGGACCGGAGGAGAGT
CGATCTATGGAGCCAAATTCAACGATGAGAACTTCGTTAAGAAGCACACCGGCCCTGGAATCCTCTCCATGGCTAATGCTGGACCTGGAACCAAC
GGTTCTCAGTTTTTCATCTGTACCGCTAAGACTGAGTGGCTCAACGGAAAGCACGTCGTGTTTGGACAAGTTGTTGAAGGCATGGATGTGATTAA
GAAGGCAGAGGCTGTTGGATCTAGCTCTGGAAGGTGCTCCAAGCCTGTGGTTATTGCTGACTGCGGTCAACTCTAGATCTGATGATGATGATGAT
CTAGTTTTATCAGGCTTTTATGTATTTGAGTCGCCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292318] | SGN-U577630 | Tomato 200607 | Build 2 | 444 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102592 [Download][View] | Facility Assigned ID: TMEAA84THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
