EST details — SGN-E292400
| Search information |
| Request: 292400 | Match: SGN-E292400 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82331 | Clone name: cLET-1-J7 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179505 is on microarray TOM1: SGN-S1-1-2.3.2.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179505 [TUS-31-O23] | Trace: SGN-T185169 | EST: SGN-E372712 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179505 [TUS-31-O23] | Trace: SGN-T185170 | EST: SGN-E372713 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292400 | Length: 583 bp (861 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292400 [] (trimmed)
GGAAGTTGAAGCTGATGTTGCGACCGGACAGCCAAGGAAGAGAACATTCAAGAAGTTCAGCTACAGAGGAGTAGATCTGGATTCTCTTCTTGACA
TGTCTACTGATGAGCTTGTTAAGCTTTACCCTGCTCGTCCTCGCAGAAGGTTCCAGAGGGGTTTGAAGAGGAAGCCTATGGCTTTGATCAAGAAG
CTGCGCAAGGCGAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAGGTTGTGAGAACACATTTGAGGAACATGATCATTGTTCCTGAGATGATTGG
AAGTGTCATTGGAATCTACAATGGAAAAACTTTCAATCAAATTGAGGTCAAGCCTGAGATGATTAGTCACTACTTAGCTGAGTTCTCCATCTCAT
ACAAGCCTGTCAAGCACGGTAGGCCCGGTATTGGTGCTACTCACTCTTCAAGGTTCATTCCATTGAAGTGATTCATCCAAATCTGTCTACATGGT
TTCTAGTAATACTAGTACTTTTGTTTTACTGCAATTTTGATGAGAACAGTGGATACTGAATGGTTCTTTGTTTGAGACTAGTAATTTGCTGATAC
ATTGCAACATTTC
TGTCTACTGATGAGCTTGTTAAGCTTTACCCTGCTCGTCCTCGCAGAAGGTTCCAGAGGGGTTTGAAGAGGAAGCCTATGGCTTTGATCAAGAAG
CTGCGCAAGGCGAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAGGTTGTGAGAACACATTTGAGGAACATGATCATTGTTCCTGAGATGATTGG
AAGTGTCATTGGAATCTACAATGGAAAAACTTTCAATCAAATTGAGGTCAAGCCTGAGATGATTAGTCACTACTTAGCTGAGTTCTCCATCTCAT
ACAAGCCTGTCAAGCACGGTAGGCCCGGTATTGGTGCTACTCACTCTTCAAGGTTCATTCCATTGAAGTGATTCATCCAAATCTGTCTACATGGT
TTCTAGTAATACTAGTACTTTTGTTTTACTGCAATTTTGATGAGAACAGTGGATACTGAATGGTTCTTTGTTTGAGACTAGTAATTTGCTGATAC
ATTGCAACATTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292400] | SGN-U577715 | Tomato 200607 | Build 2 | 166 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102674 [Download][View] | Facility Assigned ID: TMEAC52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0019 | Quality Trim Threshold: 12.5 |
Working
