EST details — SGN-E292554
| Search information |
| Request: 292554 | Match: SGN-E292554 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C81431 | Clone name: cLET-16-G22 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184829 is on microarray TOM1: SGN-S1-1-6.1.14.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184829 [TUS-45-M19] | Trace: SGN-T1847 | EST: SGN-E378231 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C184829 [TUS-45-M19] | Trace: SGN-T198513 | EST: SGN-E397187 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184829 [TUS-45-M19] | Trace: SGN-T200026 | EST: SGN-E398700 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292554 | Length: 469 bp (942 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292554 [] (trimmed)
AGGCATTTTGTACTATAAACTATTTCTCTTTCATTCCTTTCTCACTTTTCTTTGCTTTTGGGTTTCTGGTTTATTTTTTCTCTTCTAGTTTTGCT
TTGGTTTGATCTGCTTCGTGGGGGTCTTTATATTCTCTTGAAATCTTGAATTTTGGGTGTTTCTTGAAAATTCAAAGAGATGGAGAGGGACTTTA
TGGGATTGAATATCAAAGATTCTTTACTTGTAGTCAAGGATGAACCTGTTGAAAGCTCAAAAGACTCTGGGTTTCGCTGGCCAATGTCGAGCAAG
GTTGGTGTACCTCATTTCATGTCCTTGAACTCTGCTCAAGATGAGAACACCTTCAAAGCTCTATCTGCCACAGATGGAGTCGATGCTGGTCTCAA
ACGTCAGCCTGGTGAACTCCAGATGAAGCAAGTTCTTGGTGGAATTCCTGTTACAGCTCCTCATTCAATGCTTCCATCGCGTGGCTCTG
TTGGTTTGATCTGCTTCGTGGGGGTCTTTATATTCTCTTGAAATCTTGAATTTTGGGTGTTTCTTGAAAATTCAAAGAGATGGAGAGGGACTTTA
TGGGATTGAATATCAAAGATTCTTTACTTGTAGTCAAGGATGAACCTGTTGAAAGCTCAAAAGACTCTGGGTTTCGCTGGCCAATGTCGAGCAAG
GTTGGTGTACCTCATTTCATGTCCTTGAACTCTGCTCAAGATGAGAACACCTTCAAAGCTCTATCTGCCACAGATGGAGTCGATGCTGGTCTCAA
ACGTCAGCCTGGTGAACTCCAGATGAAGCAAGTTCTTGGTGGAATTCCTGTTACAGCTCCTCATTCAATGCTTCCATCGCGTGGCTCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292554] | SGN-U564446 | Tomato 200607 | Build 2 | 43 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106687 [Download][View] | Facility Assigned ID: TMECJ47TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.952 | Expected Error Rate: 0.0144 | Quality Trim Threshold: 14.5 |
Working
