EST details — SGN-E292946

Search information 
Request: 292946Match: SGN-E292946
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C80315Clone name: cLET-11-N4
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179730 is on microarray TOM1: SGN-S1-1-1.1.1.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179730 [TUS-32-I8] Trace: SGN-T185920 EST: SGN-E372425 Direction: 3' Facility: INRA
Clone: SGN-C179730 [TUS-32-I8] Trace: SGN-T185921 EST: SGN-E372426 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292946Length: 462 bp (890 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E292946 [] (trimmed) TTTTTTACGAGAAAAGATTCACAGCTAACTAACATTTTCTGATGTTTCTCTTCCCACTTTTTCAATTAATATGTTTACTGTCGTCGGAAGATATC
TGAGGCACAGCAATGCAACTAAACCAAAATAATGTGAATTTGGACATCAGTATACAATCATTAAAAGAATTCACATTCATACGTTCAAATGAAGT
AATCAAGTTGTCCTAAGGGGCTCCTTTCTCCAGCAGGATTAAGATTACAAAGCTCATCCGTCAAGGACGTACATGTCGCAAGCAACAAACCTAAG
GCTTACGAGGTGGTGAACTGCTGCTGTTACTGTTGCTGGGGCTCCTCCCTCTTAAAGGCCTTCTCTTAGGACTGCGACTCTTTGAAATCTTGCGG
GGTCCCTTGCGAGGACTGGGAGAAGAAGAGTAGGATGATGACCTCCCACGTCTTGCAGCTGCACCCCTTCCCCGCCTAGGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292946] SGN-U563713 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T105409 [Download][View] Facility Assigned ID: TMEBR74TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0231 Quality Trim Threshold: 14.5