EST details — SGN-E292954
| Search information |
| Request: 292954 | Match: SGN-E292954 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C80361 | Clone name: cLET-11-P6 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179744 is on microarray TOM1: SGN-S1-1-3.1.1.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179744 [TUS-32-I22] | Trace: SGN-T185924 | EST: SGN-E372429 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179744 [TUS-32-I22] | Trace: SGN-T185925 | EST: SGN-E372430 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292954 | Length: 538 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292954 [] (trimmed)
CTGGAAGTAGTGCAAGATATCAGGATCCTCGTTCTATTGGACCTGGATTCGTTGATGATATTCGGGGCACTTCAGATCGTATGAATGCTGGGCAC
AATGTTTTTCATGGGTCCTCCGAGAACTTGAATGCTGGGCGGCCTACTTTCCAAGGATACGGTTCTCCTGCTGGACAGAGCAGTAATATTCATCA
AGGCGCTTACCACCAGAATTATGCTGCTCAACAAAGTGCTTATCAAAGTTATCCAGCTAAAGGTGGTTACCCTAGTGGTAGTCCTTCCCAATTGC
CTTACCAGAACCCTAATCCTCATCAAGCTCCATATCAAAACATCAACTCGCAGCATCACCAACACCAGCAGGCGCCACCACCATACCAGAATATG
GCTGCACAAGGCTCCTACCATTATTGATTCTCAATACTGAGTTACTCAAAGTACCTATGGCGGGTTTTAGTCACTTTTGTACAATAATTTTAATC
TCGTGTTTTGCTATAGTTGTTGCTGAAGTGTCAGTCATAGTGATCTAACTTGTCGCATTTGAT
AATGTTTTTCATGGGTCCTCCGAGAACTTGAATGCTGGGCGGCCTACTTTCCAAGGATACGGTTCTCCTGCTGGACAGAGCAGTAATATTCATCA
AGGCGCTTACCACCAGAATTATGCTGCTCAACAAAGTGCTTATCAAAGTTATCCAGCTAAAGGTGGTTACCCTAGTGGTAGTCCTTCCCAATTGC
CTTACCAGAACCCTAATCCTCATCAAGCTCCATATCAAAACATCAACTCGCAGCATCACCAACACCAGCAGGCGCCACCACCATACCAGAATATG
GCTGCACAAGGCTCCTACCATTATTGATTCTCAATACTGAGTTACTCAAAGTACCTATGGCGGGTTTTAGTCACTTTTGTACAATAATTTTAATC
TCGTGTTTTGCTATAGTTGTTGCTGAAGTGTCAGTCATAGTGATCTAACTTGTCGCATTTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292954] | SGN-U583396 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105417 [Download][View] | Facility Assigned ID: TMEBR87TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 12.5 |
Working
