EST details — SGN-E293702
| Search information |
| Request: 293702 | Match: SGN-E293702 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82754 | Clone name: cLET-21-F22 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C183248 is on microarray TOM1: SGN-S1-1-3.3.3.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183248 [TUS-41-K22] | Trace: SGN-T196517 | EST: SGN-E395191 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183248 [TUS-41-K22] | Trace: SGN-T200118 | EST: SGN-E398792 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293702 | Length: 531 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293702 [] (trimmed)
GGCATTGCACCTGAATCAAAGGCAACGACAGAGAGTGTATATAATGCAGCTTTGGCTTTAGGGATCGCAAATCAACTAACCAATATACTCAGAGA
TGTAGGAGAAGATGCAAGAAGAGGAAGAGTATACTTACCTCAAGATGAATTAGCACAGGCAGGGCTCTCCGATGAAGACATATTTGCTGGAAAGG
TGACTGATAAGTGGAGAATCTTTATGAAGAAGCAAATCCAGAGGGCAAGGAAATTCTTTGATGAGGCAGAGAAAGGTGTCACAGAACTGAGTTCT
GCTAGTAGATGGCCGGTGTTGGCATCGTTGCTGTTATATCGCAAGATACTGGACGAGATTGAAGCAAACGACTACAACAACTTCACAAGGAGGGC
TTATGTGAGCAAGCCAAAGAAGCTTCTGACGTTGCCCATTGCTTATGCAAGATCTCTAGTGCCCCCTAAGTCAACTTCTTCCCCACTAGCAAAGA
CATGAATGAAGTTTCTAAATGCCAATTAGAGGCCTATACATACACTAAAGAAAACA
TGTAGGAGAAGATGCAAGAAGAGGAAGAGTATACTTACCTCAAGATGAATTAGCACAGGCAGGGCTCTCCGATGAAGACATATTTGCTGGAAAGG
TGACTGATAAGTGGAGAATCTTTATGAAGAAGCAAATCCAGAGGGCAAGGAAATTCTTTGATGAGGCAGAGAAAGGTGTCACAGAACTGAGTTCT
GCTAGTAGATGGCCGGTGTTGGCATCGTTGCTGTTATATCGCAAGATACTGGACGAGATTGAAGCAAACGACTACAACAACTTCACAAGGAGGGC
TTATGTGAGCAAGCCAAAGAAGCTTCTGACGTTGCCCATTGCTTATGCAAGATCTCTAGTGCCCCCTAAGTCAACTTCTTCCCCACTAGCAAAGA
CATGAATGAAGTTTCTAAATGCCAATTAGAGGCCTATACATACACTAAAGAAAACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293702] | SGN-U578302 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107824 [Download][View] | Facility Assigned ID: TMEDF35TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 12.5 |
Working
