EST details — SGN-E294605
| Search information |
| Request: 294605 | Match: SGN-E294605 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C83003 | Clone name: cLET-22-N9 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C181960 is on microarray TOM1: SGN-S1-1-3.2.10.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181960 [TUS-38-F6] | Trace: SGN-T1698 | EST: SGN-E378305 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C181960 [TUS-38-F6] | Trace: SGN-T187767 | EST: SGN-E374497 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181960 [TUS-38-F6] | Trace: SGN-T187768 | EST: SGN-E374498 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294605 | Length: 418 bp (956 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294605 [] (trimmed)
CAATTTTCCAATGGAACATGTTAAAAAATCTCTTGAAAATATTGAGTATTCTTGTAAAGATGGATTATCTCCAGCTGCTGTTTTAAAAGCTACTC
ATAAAACTAGAAGAGTCAAGCACAAGAGAAGTAGTAGAAAGAAGAAGAATGAGAATTTGGAAAATGTTTTTGTTTTTCAAGACTTGGGAGTTGAA
TTATTAGAAGAGCTTTTAATGACTTCATCATAGGAATGTTTATTATATTCTTCGTGTCGAAAATACTAAGTTCAGTTTTCGTGGGAGATAATAAT
CAAGATCGCAATGTACGAGTCTCTTTTTTTTCTTTTTTTTTTTATTTGGTCTGGATTTCTTGAAGAATTTAGAGTTTAGTTTCAAGAAGAGCTTT
TGATGAGTTGAAATAATGTCTCAGACTTGTTTTGGTAC
ATAAAACTAGAAGAGTCAAGCACAAGAGAAGTAGTAGAAAGAAGAAGAATGAGAATTTGGAAAATGTTTTTGTTTTTCAAGACTTGGGAGTTGAA
TTATTAGAAGAGCTTTTAATGACTTCATCATAGGAATGTTTATTATATTCTTCGTGTCGAAAATACTAAGTTCAGTTTTCGTGGGAGATAATAAT
CAAGATCGCAATGTACGAGTCTCTTTTTTTTCTTTTTTTTTTTATTTGGTCTGGATTTCTTGAAGAATTTAGAGTTTAGTTTCAAGAAGAGCTTT
TGATGAGTTGAAATAATGTCTCAGACTTGTTTTGGTAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294605] | SGN-U574873 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107991 [Download][View] | Facility Assigned ID: TMEDI77TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.908 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 12.5 |
Working
