EST details — SGN-E295538
| Search information |
| Request: 295538 | Match: SGN-E295538 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C83146 | Clone name: cLET-23-H9 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184757 is on microarray TOM1: SGN-S1-1-6.2.14.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184757 [TUS-45-J19] | Trace: SGN-T198718 | EST: SGN-E397392 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184757 [TUS-45-J19] | Trace: SGN-T200047 | EST: SGN-E398721 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E295538 | Length: 567 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E295538 [] (trimmed)
CAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCT
TCCTTCTACTTTCTCTATTCCAAAGGAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAAT
CTGATTTTGGCTCTTCATTCAAAATCAAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACG
AGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCT
GGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATT
ATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAAGCAATCCTCTTGATGTATTG
TCCTTCTACTTTCTCTATTCCAAAGGAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAAT
CTGATTTTGGCTCTTCATTCAAAATCAAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACG
AGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCT
GGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATT
ATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAAGCAATCCTCTTGATGTATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E295538] | SGN-U577510 | Tomato 200607 | Build 2 | 107 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T108263 [Download][View] | Facility Assigned ID: TMEDM41TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0086 | Quality Trim Threshold: 14.5 |
Working
