EST details — SGN-E295838
| Search information |
| Request: 295838 | Match: SGN-E295838 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C83681 | Clone name: cLET-25-L10 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C182056 is on microarray TOM1: SGN-S1-1-3.2.10.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182056 [TUS-38-J6] | Trace: SGN-T187785 | EST: SGN-E374515 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182056 [TUS-38-J6] | Trace: SGN-T187786 | EST: SGN-E374516 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E295838 | Length: 606 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E295838 [] (trimmed)
TTTTCCATCTGCTTTTGAAAGATTAAGCAATTCTTCAGCCTTTTTTTAAATCATCAGCTTTTGAGAGAAGACATGGCAAACAAATCTTACGAGGA
GGCCATTGTTTCCCTCCAGAACCTTATCAGTGAGAAGGGAGAGCTGGGACCATTTGTAGCAGAAAGAATTGATGAAATGACAGCTGAGTTACAAA
CAAGCAGTAAACCGTTCGATCCAGTTCACAGGATCAAGTGTGGCTTCAATTATTTCAAAACAGAGATATATGACAAAAATCCAGAATTGTTTGAC
AAACTCAAAAAAGGCCAGGAACCCAAGTTTTTTGTGTTTGCGTGCTCGGATTCACGAGTGAGCCCATCCCATATCCTCAATTTCCAGCCCGGTGA
GGCTTTCATGGTTCGAAACATAGCCAACATGGTCCCTCCTTATGACAAGCTTAGGTACTCTGGAACTGGAGCTGCTATCGAGTACGCTGTTCTCC
ATCTTAAGGTAGAAAATATTCTAGTCATTGGACACAGTAGTTGTGGAGGTATCAAGGCTCTCATGAGTCTTCCAGAAGATGGTTCTGAATCAACT
GAATTTATTGAGAATTGGGTGAAAATTGGGTTACCT
GGCCATTGTTTCCCTCCAGAACCTTATCAGTGAGAAGGGAGAGCTGGGACCATTTGTAGCAGAAAGAATTGATGAAATGACAGCTGAGTTACAAA
CAAGCAGTAAACCGTTCGATCCAGTTCACAGGATCAAGTGTGGCTTCAATTATTTCAAAACAGAGATATATGACAAAAATCCAGAATTGTTTGAC
AAACTCAAAAAAGGCCAGGAACCCAAGTTTTTTGTGTTTGCGTGCTCGGATTCACGAGTGAGCCCATCCCATATCCTCAATTTCCAGCCCGGTGA
GGCTTTCATGGTTCGAAACATAGCCAACATGGTCCCTCCTTATGACAAGCTTAGGTACTCTGGAACTGGAGCTGCTATCGAGTACGCTGTTCTCC
ATCTTAAGGTAGAAAATATTCTAGTCATTGGACACAGTAGTTGTGGAGGTATCAAGGCTCTCATGAGTCTTCCAGAAGATGGTTCTGAATCAACT
GAATTTATTGAGAATTGGGTGAAAATTGGGTTACCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E295838] | SGN-U579395 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T108563 [Download][View] | Facility Assigned ID: TMEDV65TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
