EST details — SGN-E296370
| Search information |
| Request: 296370 | Match: SGN-E296370 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C81934 | Clone name: cLET-19-B13 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C181870 is on microarray TOM1: SGN-S1-1-5.2.10.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81934 [cLET-19-B13] | Trace: SGN-T107461 | EST: SGN-E296511 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C181870 [TUS-38-B12] | Trace: SGN-T187690 | EST: SGN-E374420 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181870 [TUS-38-B12] | Trace: SGN-T187691 | EST: SGN-E374421 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E296370 | Length: 554 bp (852 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E296370 [] (trimmed)
CAATGGCGCTCACTCTCTCCAACACTTTCCTTCAAAAAAATGTCGCTCCTCCTTCATTCTCCTCCAAGAAGATGGGAATTGGGAGCAATCAAATG
CGATGGAGCTGCAGGAAGAAGGATATACATCCGCAATTCTACGATGACGCTAAGGTATATTGTAATGGAGAGCATGTGATGACAACTGGGGGAAC
AAAGAATGAGTACACAGTTGATGTTTGGTCAGGTAATCATCCTTTTTATCAAGGTAGTCGTTCACAGCTACTTCTTGATGCTGACCAGGTAGAGA
AATTCAGGAAGAAGTTTAGTGGGTTAACACAGATTATGCAAATTCCAACTCTCAAAGGAGAGATTGTGCTTCCTCCTAAGAAGAAGAAACCTACT
AAGAAGAAGTAGACTTTATTGTGTGTTTGTAATTCCCTTAGTTCGTTTGGTAAATGGGGAAATTGTTGGAGAATTAGGGGTTTTGTGTATTTTGT
GTTTGTATTTTGATGGTTTCAGTTGTGAACTCAGTCTATTATTTGAAATGGAAGTAAAAAAATTGAGTCTTTGTTCTTC
CGATGGAGCTGCAGGAAGAAGGATATACATCCGCAATTCTACGATGACGCTAAGGTATATTGTAATGGAGAGCATGTGATGACAACTGGGGGAAC
AAAGAATGAGTACACAGTTGATGTTTGGTCAGGTAATCATCCTTTTTATCAAGGTAGTCGTTCACAGCTACTTCTTGATGCTGACCAGGTAGAGA
AATTCAGGAAGAAGTTTAGTGGGTTAACACAGATTATGCAAATTCCAACTCTCAAAGGAGAGATTGTGCTTCCTCCTAAGAAGAAGAAACCTACT
AAGAAGAAGTAGACTTTATTGTGTGTTTGTAATTCCCTTAGTTCGTTTGGTAAATGGGGAAATTGTTGGAGAATTAGGGGTTTTGTGTATTTTGT
GTTTGTATTTTGATGGTTTCAGTTGTGAACTCAGTCTATTATTTGAAATGGAAGTAAAAAAATTGAGTCTTTGTTCTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E296370] | SGN-U572862 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107320 [Download][View] | Facility Assigned ID: TMECW07TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 12.5 |
Working
