EST details — SGN-E297680
| Search information |
| Request: 297680 | Match: SGN-E297680 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C84447 | Clone name: cLET-28-N16 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C191129 [TUS-62-D7] | Trace: SGN-T342294 | EST: SGN-E541419 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191129 [TUS-62-D7] | Trace: SGN-T342297 | EST: SGN-E541422 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E297680 | Length: 614 bp (939 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E297680 [] (trimmed)
GGTCTGGCTGCTGCTGCCAAGTTGTCTGATGAGGCAAGAATGAAAGATGCAGCTTCACTGGAGAAGCATGTGCTGTTAAAGAAGCTCAGAGATGC
TCTTGAAGCGTTGAGAGGACGTGTGGCGGGGAAAAACAAGGATGATGTGGAGGAAGCTATTGCTATGGTAGAAGCTTTAGCAGTACAGTTAAATC
AAAGGGAAGGAGAACTGATTCAGGAAAAGACTGAAGTGAAAAAGCTTGCAACGTTTCTGAAGCAGGCTTCTGAAGATGCTAAGAAACTTGTTGAG
GAAGAAAGAGCTTATGCAAGGGCTGAGATTGAGAATGCAAGAGCAGCTGTCCAGAGAGTTGAAGAGGCTCTTCAAGAGTATGAGAAAATGTCCGG
GGCCTCAGGGAAACAGGACATGGACGAATTGATGAAAGAAGTTCATGAGGCAAGGCGAATCAAAATGCTACATCAGCCTAGTAAGGTCATGGACA
TGGAGCATGAACTTCAAGCATTGCGAGTGCAGCTAGCAAAGAAGTGCAAGTATTCAATACAGCTTCAGAAAGAGCTGGCAAGGAAAATGGGTGAG
GAAACTGTATCACAGTTATATGAATTAGATGGCACGGAAGCCCT
TCTTGAAGCGTTGAGAGGACGTGTGGCGGGGAAAAACAAGGATGATGTGGAGGAAGCTATTGCTATGGTAGAAGCTTTAGCAGTACAGTTAAATC
AAAGGGAAGGAGAACTGATTCAGGAAAAGACTGAAGTGAAAAAGCTTGCAACGTTTCTGAAGCAGGCTTCTGAAGATGCTAAGAAACTTGTTGAG
GAAGAAAGAGCTTATGCAAGGGCTGAGATTGAGAATGCAAGAGCAGCTGTCCAGAGAGTTGAAGAGGCTCTTCAAGAGTATGAGAAAATGTCCGG
GGCCTCAGGGAAACAGGACATGGACGAATTGATGAAAGAAGTTCATGAGGCAAGGCGAATCAAAATGCTACATCAGCCTAGTAAGGTCATGGACA
TGGAGCATGAACTTCAAGCATTGCGAGTGCAGCTAGCAAAGAAGTGCAAGTATTCAATACAGCTTCAGAAAGAGCTGGCAAGGAAAATGGGTGAG
GAAACTGTATCACAGTTATATGAATTAGATGGCACGGAAGCCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E297680] | SGN-U576300 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T109474 [Download][View] | Facility Assigned ID: TMEEH80TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.935 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |
Working
