EST details — SGN-E298725
| Search information |
| Request: 298725 | Match: SGN-E298725 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C86796 | Clone name: cLET-44-F12 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179864 is on microarray TOM1: SGN-S1-1-3.2.1.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179864 [TUS-32-N22] | Trace: SGN-T1563 | EST: SGN-E378561 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C179864 [TUS-32-N22] | Trace: SGN-T186269 | EST: SGN-E372788 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179864 [TUS-32-N22] | Trace: SGN-T186270 | EST: SGN-E372789 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E298725 | Length: 437 bp (936 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E298725 [] (trimmed)
TCAGCGGACTTTTTGGGTCGTAGGCAACAACTCTGAGAAGGACCGTATAAAAGAACGCGACATCAGAACCGATCCCGGGACCCGTTTATCCCCAG
AAATCAAAAGAGCCAAAGGATCACGTATCAATCGCCGCGTAGGCAAAAAGGGACGCAAACACCCTAGTGTCGACGGAATCCACACCCGCGATGGA
GAACTCGAACGGGCAAGCGAGGGAGAAAACGACCCATAGAAAAGTAACGCCGTCACCCTCCAACTCGTAAGCACCTCACGCACGAAACAAAAGTA
TACCAACCGTCATCGTCACGCAACACGCAAGCACGCAACAGGGCCGCGGATTCCCATTATGGTCCGCGCCATCCCAAGCACGCTCGCCAAACAAA
CGGAATATCAGCCCGCCTCATATAGACCGAGCCATCCCAAGCACGCTCGCCAAACAA
AAATCAAAAGAGCCAAAGGATCACGTATCAATCGCCGCGTAGGCAAAAAGGGACGCAAACACCCTAGTGTCGACGGAATCCACACCCGCGATGGA
GAACTCGAACGGGCAAGCGAGGGAGAAAACGACCCATAGAAAAGTAACGCCGTCACCCTCCAACTCGTAAGCACCTCACGCACGAAACAAAAGTA
TACCAACCGTCATCGTCACGCAACACGCAAGCACGCAACAGGGCCGCGGATTCCCATTATGGTCCGCGCCATCCCAAGCACGCTCGCCAAACAAA
CGGAATATCAGCCCGCCTCATATAGACCGAGCCATCCCAAGCACGCTCGCCAAACAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E298725] | SGN-U597378 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T111361 [Download][View] | Facility Assigned ID: TMEGT30TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.933 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 20.5 |
Working
