EST details — SGN-E299396
| Search information |
| Request: 299396 | Match: SGN-E299396 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C86490 | Clone name: cLET-43-E6 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184799 is on microarray TOM1: SGN-S1-1-4.4.14.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184799 [TUS-45-L13] | Trace: SGN-T198729 | EST: SGN-E397403 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184799 [TUS-45-L13] | Trace: SGN-T200049 | EST: SGN-E398723 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E299396 | Length: 535 bp (828 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E299396 [] (trimmed)
GTTGCAGGGGCAAAGATAGTCAAGGTGAAGAGGTTGTTAAACCATACACACCAACTACTTTGGACTCTGACATTGGATACTTGGAGTTAGTTATA
AAGATGTATCCCCAAGGAAGGATGTCACATTATTTCCGGGAAATGCGCGAGGGTGATTACATGGAAGTGAAGGGACCCAAGGGGCGCTTTAAGTA
CCATCCTGGTCAAGTTAGAGCATTTGGAATGCTTGCAGGAGGCTCTGGCATTACCCCGATGTTCCAGGTTGCTAGAGCTATTCTTGAAAATCCCA
ACGACGTGACGAAGGTGCACCTGATATATGCTAATGTTACTTCTGAAGATATTCTTCTGAAAGAAGAGTTGGAGGGCCTTACTGTTAACTATCCT
GACCGTTTCAAAGTTTATTACGTCTTGAATCAGCCTCCTGAAGAATGGAGTGGTGGTGTGGGATTTGTCTCCAAAGAAATGATCCAAGCTCATTG
CCCTGCCCCGGCAGATGATATTAAGATACTGAGGTGTGGTCCACCACCGATGAACAAGGC
AAGATGTATCCCCAAGGAAGGATGTCACATTATTTCCGGGAAATGCGCGAGGGTGATTACATGGAAGTGAAGGGACCCAAGGGGCGCTTTAAGTA
CCATCCTGGTCAAGTTAGAGCATTTGGAATGCTTGCAGGAGGCTCTGGCATTACCCCGATGTTCCAGGTTGCTAGAGCTATTCTTGAAAATCCCA
ACGACGTGACGAAGGTGCACCTGATATATGCTAATGTTACTTCTGAAGATATTCTTCTGAAAGAAGAGTTGGAGGGCCTTACTGTTAACTATCCT
GACCGTTTCAAAGTTTATTACGTCTTGAATCAGCCTCCTGAAGAATGGAGTGGTGGTGTGGGATTTGTCTCCAAAGAAATGATCCAAGCTCATTG
CCCTGCCCCGGCAGATGATATTAAGATACTGAGGTGTGGTCCACCACCGATGAACAAGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E299396] | SGN-U583893 | Tomato 200607 | Build 2 | 45 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T111137 [Download][View] | Facility Assigned ID: TMEGN27TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0146 | Quality Trim Threshold: 14.5 |
Working
