EST details — SGN-E304007
| Search information |
| Request: 304007 | Match: SGN-E304007 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C94887 | Clone name: cLEX-6-C15 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C94887 [cLEX-6-C15] | Trace: SGN-T116163 | EST: SGN-E304145 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E304007 | Length: 591 bp (760 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E304007 [] (trimmed)
TAGTCTCTTACCATCCCATCAATATTCAATGTTAACTGAAATTGCATACATCCACGTTAACAGGAAAACATCGTAGTCGCTTCTAGCAAGAACTT
TTTACCCTGTAATTTGAAATCCAACAAACCCAGAAAAAGAAGAAGAAAAAAAGCCTGGGATTTGGATGAAAACTCACTACTGAATATGCTCTATA
TCTCACAACGGTCCATATATCCATTGTGTGCAAAGATGAAGTGCTAAACAGTTATATTCTCGCCTCAAACTATAGGTAGCTCACCACAGTCACTG
ATGACAACCCTCTTCCTTGGACGGTCACCCCTATCAGTCTCCTGGGACTCGATCAACTTCACAATGTCCATGCCTTCTAAAACTTGCCCAAACAC
AACATGCTTTTGATCCAGCCATGGGGTCTTTACAGTGCAAATGAAGAATTGGCTTCCGTTGGTATTAGGCCCTGCATTAGCCATGCTAACAATCC
CAGGTCCGGTATGAACCAACTTGAAGTTTTCATCCCTGAAGGTACGACCATATATGCTTTTACCACCGGTTCCATTTCCCTTGTCGAAATCACCC
CCTTGAATCATGAAATCTTTA
TTTACCCTGTAATTTGAAATCCAACAAACCCAGAAAAAGAAGAAGAAAAAAAGCCTGGGATTTGGATGAAAACTCACTACTGAATATGCTCTATA
TCTCACAACGGTCCATATATCCATTGTGTGCAAAGATGAAGTGCTAAACAGTTATATTCTCGCCTCAAACTATAGGTAGCTCACCACAGTCACTG
ATGACAACCCTCTTCCTTGGACGGTCACCCCTATCAGTCTCCTGGGACTCGATCAACTTCACAATGTCCATGCCTTCTAAAACTTGCCCAAACAC
AACATGCTTTTGATCCAGCCATGGGGTCTTTACAGTGCAAATGAAGAATTGGCTTCCGTTGGTATTAGGCCCTGCATTAGCCATGCTAACAATCC
CAGGTCCGGTATGAACCAACTTGAAGTTTTCATCCCTGAAGGTACGACCATATATGCTTTTACCACCGGTTCCATTTCCCTTGTCGAAATCACCC
CCTTGAATCATGAAATCTTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E304007] | SGN-U581290 | Tomato 200607 | Build 2 | 68 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T116025 [Download][View] | Facility Assigned ID: TRXAU20TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 14.5 |
Working
