EST details — SGN-E308036
| Search information |
| Request: 308036 | Match: SGN-E308036 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C96167 | Clone name: cLEY-14-M8 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192878 [TUS-66-M4] | Trace: SGN-T345305 | EST: SGN-E544430 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192878 [TUS-66-M4] | Trace: SGN-T349916 | EST: SGN-E549041 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E308036 | Length: 556 bp (934 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E308036 [] (trimmed)
GCTTCAATCTTTTTCCTCAGATTTATTTTTCATGATCTCTAAATTCTTTTTAATTTCTTCACAATTACTCTTCTTTATTTTTTACTATCAGAAAT
ATTTTTTTCTTCAAAAAAATGAAAATATTATTTGTTGATAAAGTATGCCATCCTCGATATTTTTGCTGTCATTTTTTCTTGTAAATTTGTTTCAA
AAAATATTCTGAGCCGAAAATTTATCAGAAATAACTTTTCTACCTCACAAAAGATAAATATCAAGTAATAAATATTATGCATGTGCAAATACGAC
TTCAAGCTTGAAAAACTCCTTTCTTTCTTTTAAATTTCAACTAAATTTATGGTCAAACGCTAGCTTAAGTTGCTAATTACTTTGTTATTTCTTTT
GATATATGCAGATTATAAATCAAATATAAAAAAAAAAGGTAAAAATGGAATATGAGATTTTAGGTTTGCTCCTACTTTTACTTGCATGGGCTGCA
TGGGCTATATTGACGGAGCGACGACAACGACGACTCGAGGAGTATGGGCGGTTGCCACCAGGACCACGGTGGTGGCAACTA
ATTTTTTTCTTCAAAAAAATGAAAATATTATTTGTTGATAAAGTATGCCATCCTCGATATTTTTGCTGTCATTTTTTCTTGTAAATTTGTTTCAA
AAAATATTCTGAGCCGAAAATTTATCAGAAATAACTTTTCTACCTCACAAAAGATAAATATCAAGTAATAAATATTATGCATGTGCAAATACGAC
TTCAAGCTTGAAAAACTCCTTTCTTTCTTTTAAATTTCAACTAAATTTATGGTCAAACGCTAGCTTAAGTTGCTAATTACTTTGTTATTTCTTTT
GATATATGCAGATTATAAATCAAATATAAAAAAAAAAGGTAAAAATGGAATATGAGATTTTAGGTTTGCTCCTACTTTTACTTGCATGGGCTGCA
TGGGCTATATTGACGGAGCGACGACAACGACGACTCGAGGAGTATGGGCGGTTGCCACCAGGACCACGGTGGTGGCAACTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E308036] | SGN-U566612 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T119719 [Download][View] | Facility Assigned ID: TRYCB76TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.905 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 14.5 |
Working
