EST details — SGN-C30873
| Search information |
| Request: 30873 | Match: SGN-C30873 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C30873 | Clone name: cLEG-10-I6 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180421 is on microarray TOM1: SGN-S1-1-6.2.19.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180421 [TUS-34-F3] | Trace: SGN-T187134 | EST: SGN-E375232 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180421 [TUS-34-F3] | Trace: SGN-T187135 | EST: SGN-E375233 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E251150 | Length: 542 bp (1021 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E251150 [] (trimmed)
ACATTTTCCCACTCTTCTCCCTAATGAGCCAGTTCTTGGTGTTCCTTTTTAGTTTTACTCCCTCACAAACAGGCTTACATGTCTTTGGAACTAAC
TTGATCTCTCTGAATCAGAAAGAACCACAAACATTCCGCGTCCAATGACAGTAGCTAATACCACCAAAAGCTCCGCGTATAGTTTAATGATGTAT
CTCGTTTGCATTTTTACTTGATAAATCATCTGACATATGGAGGATCCATAAACGCCCAGGTGAAGACTTGCTCATATTGAATGGCTGCATTTTCC
CAGGAATAGTCACGTCCCATACCTCTCTTCATCAATCCCTCCCAAGATGACTTATGTTCTGTATAAGTTCCAATTGCCAGCTTCAGTGTATCAAG
CAACTTTTCACTCGTTAAAGGCGAAAATGTCCACCCGGTGCCTTCACCTTTTCCTTCTTGAGCATATGGATTAAAATCCTTCACTGTGTCTCTTA
GTCCCCCAGTGCTATGAACAACAAGTATGGTGCCATATCTCATTGCATACAATTGGTTTAGGCCACA
TTGATCTCTCTGAATCAGAAAGAACCACAAACATTCCGCGTCCAATGACAGTAGCTAATACCACCAAAAGCTCCGCGTATAGTTTAATGATGTAT
CTCGTTTGCATTTTTACTTGATAAATCATCTGACATATGGAGGATCCATAAACGCCCAGGTGAAGACTTGCTCATATTGAATGGCTGCATTTTCC
CAGGAATAGTCACGTCCCATACCTCTCTTCATCAATCCCTCCCAAGATGACTTATGTTCTGTATAAGTTCCAATTGCCAGCTTCAGTGTATCAAG
CAACTTTTCACTCGTTAAAGGCGAAAATGTCCACCCGGTGCCTTCACCTTTTCCTTCTTGAGCATATGGATTAAAATCCTTCACTGTGTCTCTTA
GTCCCCCAGTGCTATGAACAACAAGTATGGTGCCATATCTCATTGCATACAATTGGTTTAGGCCACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E251150] | SGN-U568940 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T65740 [Download][View] | Facility Assigned ID: TBFBL51TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0041 | Quality Trim Threshold: 14.5 |
Working
