EST details — SGN-E311203
| Search information |
| Request: 311203 | Match: SGN-E311203 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C99188 | Clone name: cLEZ-16-G20 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: Alias clone SGN-C184857 is on microarray TOM1: SGN-S1-1-2.2.14.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184857 [TUS-45-N23] | Trace: SGN-T198747 | EST: SGN-E397421 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184857 [TUS-45-N23] | Trace: SGN-T200052 | EST: SGN-E398726 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E311203 | Length: 594 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E311203 [] (trimmed)
GCTGATTCGGAAATTTTTTCTCTATCTGGGTTCCTTTTTCTACCGTCAAATACTCAATTGAACTAATTAGAAAACCATATATTCGGTTTATGTCT
CTTTCTATTCACTACCTCTTCATCATTTTCTAGCTTATTCTCTTTCTCTCTCTACAACTTTTTCTTCTTCTTCTGGGTTTTGATTCTGACTGCAA
GATGAAGAAATTTATCTTGAATTTGGAGGTGCATGATGTAAGAGACAAGCGCAAGGCCTTGAAGACGGTCTCTGCTCTTCCAGGAATTGATGAAA
TCTCAATGGATATGAAAGGTAAGAAATTAACCATCATCGGAACAGTTGATCCAGTGAGTGTAGTGAGCAAACTTCGGAAATTTTGGCCAGCACAC
ATAATCTCAGTAGGACCAGCGAAAGAGCCAGAGAAGAAAGAGGAACCAAAGAAAGAAGAGGCCAAGAAAGAGGAGGCTAAGAAGGAGGGCGAGGG
CAAGAAAGAAGACGCTCCGAAGGAGGAAGGTAAGAAAGAGGAGGGTAAGAAGGAAGAAGAAGGTAAGAAGGATGAAAATAAGAAAGACGAGCCCA
AAAAGGACGGAGAGAAGAAAGCAG
CTTTCTATTCACTACCTCTTCATCATTTTCTAGCTTATTCTCTTTCTCTCTCTACAACTTTTTCTTCTTCTTCTGGGTTTTGATTCTGACTGCAA
GATGAAGAAATTTATCTTGAATTTGGAGGTGCATGATGTAAGAGACAAGCGCAAGGCCTTGAAGACGGTCTCTGCTCTTCCAGGAATTGATGAAA
TCTCAATGGATATGAAAGGTAAGAAATTAACCATCATCGGAACAGTTGATCCAGTGAGTGTAGTGAGCAAACTTCGGAAATTTTGGCCAGCACAC
ATAATCTCAGTAGGACCAGCGAAAGAGCCAGAGAAGAAAGAGGAACCAAAGAAAGAAGAGGCCAAGAAAGAGGAGGCTAAGAAGGAGGGCGAGGG
CAAGAAAGAAGACGCTCCGAAGGAGGAAGGTAAGAAAGAGGAGGGTAAGAAGGAAGAAGAAGGTAAGAAGGATGAAAATAAGAAAGACGAGCCCA
AAAAGGACGGAGAGAAGAAAGCAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E311203] | SGN-U586322 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T123205 [Download][View] | Facility Assigned ID: TRZCJ46TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |
Working
